Comamonas odontotermitis: LAD35_03145
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Entry
LAD35_03145 CDS
T07833
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00470
D-Amino acid metabolism
codo00550
Peptidoglycan biosynthesis
codo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LAD35_03145 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LAD35_03145 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
codo01011
]
LAD35_03145 (murD)
Enzymes [BR:
codo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LAD35_03145 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
codo01011
]
Precursor biosynthesis
Amino acid ligase
LAD35_03145 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
AlaDh_PNT_C
2-Hacid_dh_C
NAD_binding_2
NAD_binding_7
ThiF
Oxidored_nitro
Pyr_redox_3
DUF3306
Motif
Other DBs
NCBI-ProteinID:
UBB17657
LinkDB
All DBs
Position
695629..697638
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AA seq
669 aa
AA seq
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MSAEAFKPLTDNPAMAPGGTAPVADSAPHAADENATLVQGMQAPIASEPVAAFAVEDGAA
PPVPQGDVVEGDASAAPSADEGNAAAPVAPDAVVELAAPVAEPIPDVSTLTAAKDAAAFV
AQIFADPSISDAASGEVTAVAAQPAEQAVEYPPVPVQWPQGQVQHLQGQRVLVLGLGASG
LAMARWCVRAGAEVTVADTREAPPQLAQLQTELPAVRFVAGDLSAALIDGQSMGAVYRSP
GLSPAVVAPVVEAARAIGLPVSGELDLFSMALGGLAQAHGYQPKVLAITGTNGKTTVTSL
TGQLLEHAGIRTAVAGNIGPTLLDTLSERIDAEDLPQAWVLELSSFQLEDAHAFEPTAAT
VLNITQDHLDWHGSMQAYAAAKARIFGKSALMVLNRDDSMVMEMLPPPVRIKLQRPQLRA
HISFGLDMPSQPGDFGLEVVNGMAWLVRAQDDGNSASNKRNQAASDEIFVQRLMPADALR
IRGRHNAMNALAALALGHAAGAAFGPMLFGLREYRGERHRVEPIGVVDDIEYFDDSKGTN
VGATVAALMGLGADRKIVLILGGDGKGQDFSPLADPVLRYARTVVLIGRDAPLIEEALAD
THVPMQHAQTMEEAVQLCSQQARAGDAVLMSPACASLDMFRNYAHRAEVFCQAVATLAEE
KGSSLEVQP
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgaagccttcaaacccctcaccgacaaccctgcgatggcgccgggtggcact
gcgccggtggctgattctgcgccgcacgcagcggatgaaaatgcgacgctggtgcaagga
atgcaggcaccaattgcttctgagcccgtggcagcctttgctgtcgaagatggagctgcg
ccgccagtgccgcaaggtgatgtggtggagggggacgcatctgcagcgcccagtgccgat
gagggaaatgctgccgcgcctgtggcacctgatgcagtcgttgagcttgccgcgcctgtt
gcagagcccattcctgatgtatccacactgacggcggccaaggatgctgccgcctttgtg
gcgcagatttttgcagaccccagcatctccgatgccgccagtggtgaagtgacggcagta
gccgcacagcctgccgagcaggcggtggaatacccaccggtgccagtgcagtggccgcaa
ggtcaagtacagcacctgcaggggcagcgggtgctggtgctgggcttgggcgcctctggc
ctcgccatggcacgctggtgcgtgcgcgcaggcgcggaagtgactgtggcagacacgcgc
gaagcgccgccccagcttgcccaattgcagacggagttgcctgcggtacgctttgtggcg
ggcgacttgtctgctgccttgattgatggccagagtatgggcgcggtataccgctctcca
ggcctgagtcctgctgtcgtagccccggttgtggaggccgcgcgagccattggcctgccc
gtcagtggcgagctcgaccttttctcaatggcgctgggcggcctcgcgcaagcgcatggc
taccaacccaaggtgctggccatcactggcaccaatggcaagaccacagtcacctcgctt
acggggcaactgcttgagcacgccggtatccgcactgcggtggctggcaacatcggcccg
accttgcttgataccttgtctgaacgcatcgatgccgaagacctgccgcaggcctgggtg
ctggagctgtccagctttcagctcgaagacgcgcatgcattcgagccgacggccgccacg
gtgctcaacatcacgcaggatcacctggactggcacggcagcatgcaggcctatgccgcc
gccaaggcccgaatctttggcaagagcgccttgatggtgctcaaccgtgatgattcgatg
gtgatggaaatgctgccgccacccgtacgcatcaagctccaacgccctcaattgcgcgcg
cacatcagctttgggttggatatgcccagccagcctggcgatttcgggctggaagtggtc
aatggcatggcatggctggtgcgggcgcaagatgatggcaacagtgccagcaacaagcgc
aaccaggctgcgagcgacgaaatttttgtacagcgcctgatgccggccgatgccttgcgc
attcgcggtcgccacaacgccatgaacgcactggctgcgctggcgctgggccatgccgcg
ggcgcagcgttcggcccgatgctgtttggcctgcgcgagtaccggggcgaacgccaccgt
gtcgagcccattggcgtggtggatgacatcgagtacttcgacgacagcaagggcaccaat
gtcggtgcaacggttgcggccctgatggggctgggcgcggaccgcaaaattgttctgatc
ctgggtggcgacggcaaaggccaggacttctcgccgctggcagatcctgtgttgcgctat
gcgcgcacggtggtattgattggccgcgatgcgccgctgatcgaagaagcgctggccgac
acgcatgtgccgatgcagcatgcgcagaccatggaagaggcggtgcagctatgcagccag
caggcccgcgcgggtgatgcggtgctgatgtctccggcctgtgccagtctggatatgttc
aggaactatgcccaccgtgccgaggtgttctgccaggcggtcgccacactggccgaagaa
aaaggcagcagcctggaggtgcagccatga
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