Comamonas odontotermitis: LAD35_04610
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Entry
LAD35_04610 CDS
T07833
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
codo
Comamonas odontotermitis
Pathway
codo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAD35_04610 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
codo03032
]
LAD35_04610 (dnaB)
Enzymes [BR:
codo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
LAD35_04610 (dnaB)
DNA replication proteins [BR:
codo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LAD35_04610 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
AAA_24
ATPase
CbiC
Motif
Other DBs
NCBI-ProteinID:
UBB18992
LinkDB
All DBs
Position
984440..985849
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AA seq
469 aa
AA seq
DB search
MSETFPPMDDAFITPDKQVAQLRIPPHSIESESSVLGGLLLDNNAWDRVGDVLAEDNFYR
HEHKLIFTAIASMINAGKPADVITVYEHLQGIGKAEEVGGLAYLNQLAQYVPSATNIRRY
GEIVRERSILRKLVTASDEIATNAFNPQGKTVDRVLDEAEQKIFAIGEEGSRMKQGFQSL
DTLVVDLLDRVQEMADNPVDVTGVPTGFVDLDRMTSGLQAGDLVVLAARPSMGKTSFAVN
IAEHVALNEGLPVAVFSMEMGAAQLAVRIVGSIGRVNQGNLRTGKLTDEEWPRLSEAIER
LRTVSLHIDETPGLTPSELRANARRLARQCGKLGLIVVDYLQLMSGSGSAASSDNRATEL
GEISRGLKMLAKELQCPVIALSQLNRSVEQRTDKRPMMSDLRESGAIEQDADIIMFIYRD
DYYNKESNEPNVAEVIIGKQRNGPTGTVKLFFQKNQTRFENLAVGADDY
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaccttccccccgatggacgacgcgttcatcacccccgacaaacaggtggcg
cagttgcgcattccgccgcattccatcgaatcggaatcgagcgtgctgggtggcctgctg
cttgacaacaacgcctgggaccgggtgggcgacgtactggccgaagacaacttctaccgc
catgagcacaagctgatcttcaccgccatcgccagcatgatcaacgcaggcaagcccgcc
gacgtgatcactgtctacgaacatctgcagggcatcggcaaggccgaagaagtagggggg
ctggcctatctgaaccagttggcgcagtacgtgcccagcgccaccaatatccgccgctac
ggcgaaatcgtgcgggaacgctccattttgcgcaaactggtgacggccagcgacgaaatc
gccaccaacgccttcaatccgcagggcaagacggtggaccgcgtgctggacgaggccgag
cagaagatctttgccattggcgaagaaggctcgcgcatgaagcagggcttccagtcgctg
gacaccctggtggtcgacttgcttgaccgcgtgcaggagatggcggacaacccggtcgat
gtgactggcgtgcccacgggctttgtcgatctggaccggatgaccagtggcctgcaggcg
ggcgacctggtggtgctggcggcacgtccgtccatgggcaagacctcgtttgcggtgaac
attgccgagcatgtggcgctcaacgaggggctgccggtggcggtgttctctatggaaatg
ggcgcggcccagctggcggtgcgtatcgtcggctcgatcggccgcgtcaaccagggcaat
ctgcgcaccggcaagctgaccgatgaggaatggccgcgtctgtccgaggcgatcgagcgc
ctgcgcaccgtcagcctgcacatcgatgaaacaccgggccttacgccatcggagctgcgc
gccaatgcgcggcgcctcgcgcgccagtgcggcaagctgggcctgattgtggtcgactac
ctgcagctgatgagcggctcgggcagcgctgcctcatcggacaaccgcgccaccgagctg
ggcgaaatctcgcgtggcctgaagatgctggccaaggagctgcaatgcccggtgatcgcg
ctgtcgcagctcaaccgttcggtggagcagcgcaccgacaagcggcccatgatgtctgac
ctgcgcgaatcgggcgccattgagcaggacgcggacatcatcatgttcatctaccgcgac
gactactacaacaaggagagcaacgagcccaatgttgccgaggtcatcatcggcaagcag
cgtaacgggccgacgggtaccgtcaagctcttcttccagaagaaccagacccgtttcgag
aacctggctgtgggcgcagacgattattga
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