Comamonas odontotermitis: LAD35_06375
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Entry
LAD35_06375 CDS
T07833
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00020
Citrate cycle (TCA cycle)
codo00190
Oxidative phosphorylation
codo00650
Butanoate metabolism
codo00720
Other carbon fixation pathways
codo01100
Metabolic pathways
codo01110
Biosynthesis of secondary metabolites
codo01120
Microbial metabolism in diverse environments
codo01200
Carbon metabolism
Module
codo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
codo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
codo_M00149
Succinate dehydrogenase, prokaryotes
codo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LAD35_06375 (sdhA)
00650 Butanoate metabolism
LAD35_06375 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LAD35_06375 (sdhA)
00720 Other carbon fixation pathways
LAD35_06375 (sdhA)
Enzymes [BR:
codo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LAD35_06375 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
HI0933_like
FAD_binding_3
GIDA
Pyr_redox_3
Lycopene_cycl
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
UBB18260
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All DBs
Position
complement(1385690..1387495)
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AA seq
601 aa
AA seq
DB search
MSYTKENITKRKFDVVIVGAGGSGLRAALELSKAGLSVAALSKVFPTRSHTVAAQGGVSA
SLGNMSPDNWEWHFYDTIKGSDWLGDQDAIEFMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANHGEKPVQRACAAADRTGHAMLHTLYQQNVKSKTNFFVEWMALDLIRDESG
DVVGVTALELETGDLYELHAKAVLLATGGAGRIFQASTNAFINTGDGLGMAARAGIPLQD
MEFWQFHPTGVAGAGVLLTEGCRGEGAILRNSEGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDYILLDMTHLGAETIHKRLPSVEEIGHNFANVDITKEPIPVVPTIHYQ
MGGIPTNINGQVVVWDGEKNNVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGKSAGK
HIVNYVNGYGEFKEMPENASDFSLSRLNKLDESSSGEYAQNVANDIRNCMQQHAGVFRTQ
KSMDEGVKKIAEIRARVGGVTLKDKSKVWNTARMEALEVANLIEVAQATMVSAAARTECR
GAHTVDDYEHPADDPKYPLGRNDIDWLKHTLWYSDSNSLDYKPVQLKPLTVPSVPPKVRT
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgagctatacaaaagagaacatcaccaaacgcaagtttgacgtggtcatcgttggcgca
ggcgggtctggcttgcgcgctgcactggagctgtcgaaggctggcctgtccgttgctgca
ctgtccaaggttttccccacccgctcgcacaccgtggcggcgcagggtggcgtgtccgca
tcgctgggcaacatgtcgccggacaactgggaatggcacttctacgacaccatcaagggc
tccgactggctgggcgaccaggacgccatcgagttcatgtgccgtgaagcacccaaggtt
gtgtacgaacttgaacacttcggcatgccttttgaccgcaatcccgatggcacgatctac
cagcgtccatttggcggccacacggccaaccatggcgaaaagcccgtgcaacgtgcctgc
gctgcagccgaccgtaccggccacgccatgctgcacacgctctaccagcagaacgtcaag
tccaagaccaacttcttcgtggagtggatggcactggatctgatccgtgacgaatcgggc
gacgtggtcggcgtgaccgcgctggagctggaaaccggtgatctctatgagctgcacgcc
aaggccgtgctgctggctaccggcggcgctggccgcatcttccaggcatcgaccaacgcg
ttcatcaacaccggcgacggcctgggcatggcggcacgcgccggcattccgctgcaggac
atggagttctggcagttccaccccaccggcgtggccggcgcaggcgtgctgctgaccgaa
gggtgtcgcggcgaaggcgccattctgcgcaacagcgaaggcgaacgcttcatggagcgt
tatgcgcccaccctgaaggatctggcaccccgcgacttcgtctcgcgctcgatggaccag
gaaatcaaggaaggccgtggctgcggtcccaacaaggactacatcctgctggacatgacc
cacctgggagccgaaaccatccacaagcgcctgccgtccgtggaagagatcggccacaac
tttgccaacgtggacatcaccaaggagccaatccccgtggtgcccaccatccactaccag
atgggtggcattcctaccaacatcaacggccaggtcgtggtgtgggatggcgagaagaac
aacgtggtcaacggactgtacgccgtgggcgaatgctcctgcgtgtcggtgcacggcgcc
aaccgcctgggcaccaactcgctgctggacctgctggtgttcggcaagtcggccggcaag
cacatcgtcaactacgtcaatggctatggcgaattcaaggaaatgcctgaaaacgcttcc
gacttctcgctctcgcgcctcaacaagctcgacgaatcgagcagcggcgagtatgcgcag
aacgtggccaacgacatccgcaactgcatgcagcagcacgcaggtgtgttccgcacgcaa
aagagcatggacgaaggcgtcaagaagattgccgagatccgcgctcgcgtgggcggtgtg
accttgaaggacaaatccaaggtctggaacacggcccgcatggaagcactggaagtggcc
aacctgatcgaagtggcgcaggccaccatggtttctgctgctgcccgtaccgaatgccgt
ggcgcccacaccgtggatgactacgagcatcctgccgacgatcccaagtaccctctgggc
cgcaatgacatcgactggctcaagcacaccctgtggtacagcgattccaacagcctggat
tacaagccggtccagctcaagcctctgaccgtgccatccgtacctcccaaggtccgtacg
ttctaa
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