Comamonas odontotermitis: LAD35_06510
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Entry
LAD35_06510 CDS
T07833
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00740
Riboflavin metabolism
codo00790
Folate biosynthesis
codo01100
Metabolic pathways
codo01110
Biosynthesis of secondary metabolites
codo01240
Biosynthesis of cofactors
Module
codo_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
LAD35_06510 (ribB)
00790 Folate biosynthesis
LAD35_06510 (ribB)
Enzymes [BR:
codo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
LAD35_06510 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
LAD35_06510 (ribB)
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Gene cluster
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
UBB18284
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All DBs
Position
complement(1410995..1412116)
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AA seq
373 aa
AA seq
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MSSPLSPAPISPVEEIVAEMRAGRMVILVDEEDRENEGDLVLASDHVTPEAINFMAKWGR
GLICLTLTRERCERLELRQMTARNGAPLSTAFTVSIEAAEGVTTGISAADRARTVQAAVA
PHAKASDLVQPGHIFPLQAVDGGVLMRAGHTEAGCDLARMAGCSPSAVICEVMKDDGTMA
RLPDLQLFCAEHGIKIGTIADLIEYRSRNESLVERISSRSLQTAHGEFTAHLYEDRASHA
VHIALVKGEVKAETDVPVRVHEPLSVMDLLETNRSMHSWTLDASLAYLGGQDSGVAVLLN
CNESASQLVQQFDGKARAAQAPERGRMDLRTYGIGAQILRDCGVQKMRLMGAPRRLPSMA
GYGLEITGYISKE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccttgtcccctgcaccgatctctccggtggaggaaatcgttgccgaaatg
cgcgctgggcgcatggtcatcctggtcgatgaagaagaccgcgagaacgaaggcgatctg
gtgctggcttcggaccatgtcacgcccgaggccatcaacttcatggccaagtggggccga
ggcctgatctgcctgaccctgacccgcgagcgctgcgagcgcctggagctgcgccagatg
acggcgcgcaacggcgccccgctctccaccgcctttaccgtctccatcgaagctgccgag
ggcgtcaccaccggcatctcggccgcagaccgcgcccgcaccgtgcaggccgccgtggcg
ccccatgccaaggccagcgatctggtgcagcccggccacatctttccgctgcaggccgtc
gatggcggcgtgctcatgcgtgcaggccataccgaagcgggctgcgatctggcacgcatg
gctggctgctcgccttctgctgtcatctgcgaggtgatgaaggacgacggcaccatggcc
cgcctgcccgatctgcagctgttctgcgccgaacacggcatcaagatcggcaccattgct
gacctgatcgaataccgcagccgcaacgaaagcctggtcgaacgcatcagcagccgcagc
ctgcagaccgcgcacggcgaattcaccgcccacctgtatgaagaccgcgccagccatgcc
gtgcacatcgccctcgtcaagggcgaagtgaaggccgagaccgacgtgcccgtgcgcgtg
catgagcccctgtcggtaatggacctgctggaaaccaaccgctccatgcacagctggacg
ctggacgccagcctcgcctacctgggcgggcaggacagcggcgtggccgtgctgctcaac
tgcaatgaaagcgccagccagctggtgcagcagttcgacggcaaggcccgcgccgcacag
gcgcccgagcgtggccgcatggacctgcgcacctacggcatcggcgcgcagatcctgcgt
gactgcggcgtacagaaaatgcgcctgatgggcgccccccgccgcctgcccagcatggca
ggctacggactcgaaatcaccggatacatcagcaaggaataa
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