Comamonas odontotermitis: LAD35_07110
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Entry
LAD35_07110 CDS
T07833
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
codo
Comamonas odontotermitis
Pathway
codo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LAD35_07110 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_07110 (recC)
Enzymes [BR:
codo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LAD35_07110 (recC)
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAD35_07110 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UBB18399
LinkDB
All DBs
Position
1511483..1515133
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AA seq
1216 aa
AA seq
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MNAPVSPAITPGLMVIHSNHPEALRDLVVAWMRRYPLAPLESETILVQSNGIAQWLKLSL
AQPVAQGGCGVTAAVDVQLPAQFLWRAYRTVLGKHQVPEISPLDKQPLTWRLMHLLPQLL
QQDTFAALRRFLQDDGDQRKRYQLAERIADLFDQYQVYRADWLEDWAQGRDVLRTARGGE
APLAADQRWQAALWRSLLGDVGTAGMQTSRAAVHQQFLGFWQAPHTTPLGLPRRIVVFGI
SSMPAQTLQALAAISSTCQVLLCVHNPCRHHWSDIVADKDLLRHQYRRQARKRSMAHVLS
DDELHQHAHPLLAAWGKQGRDYIHLIDEFDDSRQCAAQLAPINGGRIDLFSDDEPRHMLA
QLQDDILDLRPLAESRARWPVFSPVQDGTIRFATAFSPQREVEALHDQLLARMDADPALA
PRDIIVMVPDINDYAPHIEAVFGRIGRDDPRYIPYTVADQGQRGRAPLLVALEHVLAMPE
SRFAVSEILDLLAVDAVRQRFGIGESDVPLLHRWIEGAGVRWGLDGAQRARIGLAQAGET
NSWRFGLRRMLLGFAVGQGEALADIEPYDEIGGLDAVALGGLAALLRALEQSCTLLAEPV
SPEEWVERARTVLELLLAPRQERESLLRDQLLQGLDKWLTQCKVAEFADAVPLSVLREVW
LAGMDAGSLNQRFMAGSVSFCSLMPMRAIPFKLVCLLGMNDGAYPRPVSVLDFDLMRQEY
RPGDRSRRDDDRYLLLEAVLSAREQLYISWVGRSIRDSTVRPASVLVGQLRDHLSQGWRL
AGGGEAPDGSQPPTDAERARMLAAITLEHPLQAFSPRYFAQPMAGGNPTGSLFTYAQEWH
GVHAPAILDEYQEAGAGLLPMEERDTAVGLRMLQDFALQPVQAFFRQRLRVYFAEEDLTS
QDDEMFTPDGLQAWQLQARLLADVQPWLESQDAQALQGQSLPGDLAAQLALSAARLQREG
MLPLQGFAECAVQPATQAAQRGLLHYAQALRIWPQRMGEAWELRSSDADAGIDVADWLRG
LRAAAGVAEADLPRPDLTRPEQCARITLSAGRLHSGKEVRHDRLLRHWVEHLAWHVAGRP
LVSVVCSESGIAVLPPLPGAQARMHWHALLALWAEGMREPLPLAARTGIAAAQGMQAQQV
ASVYDDAYRGTGEVQRLPELARSYPDFDHLQADGRFAQLAAQLYGPMLECVRLISSHDPA
ALGRIARGEADTGGAP
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccccgtatcgccagccatcacccccggtctgatggtgatccacagcaaccac
cccgaagccctgcgcgatctggtggtggcctggatgcggcgctacccgctcgcgccgctg
gagagcgaaaccattctggtgcagagcaatggcatcgcgcagtggctcaagctgtcgctg
gcgcagcccgtggcgcaaggcggctgtggggtgacggctgccgtcgatgtgcagctgccc
gcgcagtttctgtggcgcgcctaccgcaccgtgctgggcaagcaccaggtgcccgagatt
tcgccgctcgacaagcaaccgctgacctggcggctgatgcacctgctgcctcagttgctg
cagcaggacacctttgccgcgctgcgccgctttctgcaggatgatggcgaccagcgcaag
cgctaccagctggccgagcgcattgccgatttgttcgaccagtaccaggtctaccgtgca
gactggctcgaagactgggcgcagggccgcgatgtgctgcgcacggccagaggcggcgag
gcaccactcgcggcagaccagcgctggcaggccgcgctgtggcgcagcctgctgggcgac
gtaggcactgcaggcatgcagaccagccgcgctgccgtgcaccagcagtttctgggcttc
tggcaggcaccgcacaccacacccctggggttgccgcgccgcattgtggtgttcggtatc
tcgtccatgcctgcccagaccttgcaggcactggctgccatttcttctacctgccaggtg
ctgctgtgcgtgcacaacccgtgccgccaccattggtcggacatcgtggccgacaaggac
ctgctgcgccaccagtaccgccgccaggcccgcaagcgcagcatggcccatgtgctgagc
gatgacgaactgcaccagcatgcccaccccctgttggcagcctggggcaagcaggggcgc
gattacatccatctgatcgacgagtttgatgactcgcgccaatgcgcagcgcaactggca
cccatcaacggtggccgcatcgacctgttcagcgacgatgaacctcgccacatgctggcc
cagttgcaggacgacattctggacctgcgaccgctcgcagaaagccgcgcgcgctggccg
gtgttctcgcctgtgcaggacggcaccatccgctttgcgacggctttcagcccgcagcgc
gaggtggaagccctgcacgaccagctgctggcgcgcatggatgccgaccccgcgcttgcg
ccgcgcgacatcatcgtgatggtgccggacatcaacgactacgcgccgcatatcgaggcc
gtgtttggccgcatcggccgcgacgacccgcgctacatcccctacaccgtggcagaccag
ggccagcgcggccgcgcgccgctgctggtggcgctggagcatgtgctggccatgccggag
agccgctttgccgtcagcgaaattctggatctgctggcggtggacgccgtgcgccagcgc
tttggcattggtgaaagcgatgtgccgctgctgcaccgctggatcgaaggcgcgggcgtg
cgctgggggctggatggcgcgcagcgcgcgcgcatcggccttgcacaggccggagaaacc
aacagctggcgctttggcctgcgccgcatgctgctgggttttgccgtggggcagggcgag
gcgctggcagacatcgagccgtacgacgaaattggcggcctcgatgccgtggcgctgggc
gggctggccgcgctgctgcgcgcgctggagcaatcctgcaccctgctggccgagccggtg
tcgcctgaggaatgggtggagcgcgcccgcaccgtgctggagctgctgctggcaccccgc
caggagcgcgaaagcctgctgcgcgatcagctgctgcaggggctggacaaatggctcacc
cagtgcaaggtcgcggagtttgcagacgcggtgccgctgtcggtgctgcgcgaggtgtgg
ctggcgggcatggatgctggcagcctcaaccagcgcttcatggcgggctcggtgagcttc
tgctcgctgatgccgatgcgggcgatcccgttcaagctcgtgtgcctgctgggcatgaac
gacggcgcctacccgcgccccgtctccgtactcgattttgacctgatgcgccaggaatac
cggccgggcgaccgctcgcgccgcgacgacgaccgctacctgctgctggaagccgtgctc
tcggcgcgcgagcagctctacatcagctgggtggggcgcagcatccgcgacagcaccgtg
cggcctgcctcggtgctggttggccagttgcgcgaccatctttcacaaggctggcgactg
gcggggggtggcgaggcgccggacggcagccagccgcccaccgacgcggagcgcgcacgc
atgcttgccgccatcacgctggaacacccgctgcaggccttcagcccgcgttacttcgcg
cagcctatggcaggcggcaaccccacgggcagcctgttcacctatgcgcaggaatggcac
ggcgtgcatgcgcctgcaattcttgatgaatatcaagaggcaggcgcaggtctgctgccg
atggaggagcgcgataccgcagtgggattgcgcatgctgcaggactttgccctgcaaccc
gtgcaggccttcttccgccagcgcctgcgcgtctactttgccgaggaagacctgaccagc
caggacgacgaaatgttcacccccgatggcctgcaggcctggcagttgcaggcccgcctg
ctggcggatgtgcagccctggctggagtcgcaggacgcccaggccctgcagggccagagt
ctgccgggcgatctggcagcgcagctggcactgtcagcagcccgcctgcagcgcgaaggc
atgctgccgctgcaaggttttgccgaatgtgcggtgcagcctgccacccaggcggcccag
cgcggcctgctgcattacgcccaggcactgcgcatctggccgcagcgaatgggcgaagcc
tgggagctgcgcagcagcgatgccgatgccggtatcgacgtggcagactggctgcgcggc
ctgcgcgcggcagcgggcgtggccgaggccgacctgccccggccagacctcacacgcccc
gagcaatgcgcgcgcatcacgctctccgccgggcggctgcattcaggcaaggaagtgcgg
catgaccgcctgctacgccactgggtggagcacctggcctggcacgtagccgggcggccg
ctggtgagcgtggtgtgcagcgaatcgggcattgccgtattgccgccgctgcccggcgcg
caggcccggatgcactggcacgccctgctggcgctgtgggctgaaggcatgcgcgagccg
ctgccgctggccgcacgcaccggcattgccgctgcgcagggcatgcaggcgcagcaggtt
gccagcgtatatgacgacgcctaccgtggcaccggagaggtgcagcgcctgcccgagctg
gcgcgcagctaccccgattttgaccacctgcaggccgatggccgatttgcgcaactggcg
gcgcagctgtatggcccgatgctggaatgcgtgcgcctcatcagcagccacgaccccgca
gcgctgggtcgcatcgcccgtggcgaggcagatacgggaggcgcgccatga
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