Comamonas odontotermitis: LAD35_08100
Help
Entry
LAD35_08100 CDS
T07833
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
codo
Comamonas odontotermitis
Pathway
codo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LAD35_08100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
codo03021
]
LAD35_08100
Transcription machinery [BR:
codo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LAD35_08100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UBB18584
LinkDB
All DBs
Position
1741046..1741594
Genome browser
AA seq
182 aa
AA seq
DB search
MVFHSNHTEIAALYVDHHGWLLRWLRRRLHSAAEAADLAHDTFLRLLTGQRSRSFASAGE
TRAYLRVTAQNLCINLWHRQEIERAWLDMLASTPEASYPSAERQAIVLQALEEIGHMLSA
LSPKAARAFTLAVVCEMTDDEVGAELGVSGRMVRKYVAQAMLGCLTLSARQTAAELQQEP
QA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtcttccattcaaaccacacagagattgccgcgctttacgttgaccaccatggctgg
ctgctgcgctggctccgccggcggctgcattcggccgcagaggcggcagatcttgcgcac
gacacctttttgcgcctgcttaccggccagcgcagccgaagctttgccagtgctggggag
acacgggcgtatttgcgtgtgacggcgcagaacctgtgcatcaatctctggcatcgccag
gagatcgagcgcgcctggctcgacatgctggcctcgactcccgaggccagctacccatca
gccgagcgacaggccattgtgttgcaggcgctcgaagaaataggacacatgctcagcgca
ctctcgcccaaagccgcgcgggcttttaccctggcggtggtgtgcgaaatgaccgatgac
gaagtgggcgccgaactgggggtctccggccgcatggtgcgcaagtacgtggcgcaagcc
atgcttggctgcctgaccttgagcgcccgtcagacggcggccgagttgcaacaggagcct
caggcgtga
DBGET
integrated database retrieval system
