Comamonas odontotermitis: LAD35_08290
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Entry
LAD35_08290 CDS
T07833
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
codo02000
]
LAD35_08290
Transporters [BR:
codo02000
]
Other transporters
Pores ion channels [TC:
1
]
LAD35_08290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
UBB18618
LinkDB
All DBs
Position
1788576..1790897
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AA seq
773 aa
AA seq
DB search
MGDQGQKKTGLDAAVWADRHARGIKVYRLTPVALAMALLACQAQAQVQGSSMPQDTSASV
STGQDNAQADTELAVQRVVASAAPGIRSELAQTTQIIESDALLQQVNAGKSLGEALGQLV
PGVDLGGQSRSNFGQNLRGRTMLVMLDGVSLNSSRGTARQLDSIDPFNIERIEVLSGASA
LYGGGATGGIVNIITKKGSAAGMQLGSEVGVTSGFQGSRDHQYRLAQSIAGGNDRVQARL
GIALQNNGSFYDGKGTPVRTDIAQTDTQNTKGVDVLGNMQIKISPQQTLGLTGQYYRNRF
DGSSYLYGGPNLAGIMGGKPELLEQRGGFVSDVMPKTERALFNADYHAAQVFGGQDLYVQ
GFWRQEKLDFAPFPSSVVTASRQNTDTWGLKAALSKTWGGINLRYGVDWDRESFDGEGAV
FDTAQSLASGGMVNRQIGTVGRYAGYRVNTAAAFAQAEWKLDPQWTLNGGLRYQKTDLTV
DDFVGYTQQLSMLLGRGTSADAIPGGKNSYNVSLFNLGARYKIDAARSTWLNYAEGFELP
DPAKYYGQGSYVAKGAHWQLVSAIDPESSPLKGIKTRQLEWGFKQASGALRAQTALFYAW
SDQTLQLNNSNNNVTINVADEKRRNYGWEGAIDYTVARGWDVGGNALWIRSETRQNGNWA
KQSIMTASPSKLSAYVQWSPNPVTLRLQATHMFALKDASALKIDGFTTVDLMGGVKLPVG
RLNFGIQNLLDKQYLTTWSQRAMALYGTGAVSPQAFAFYGRGRTFALNYAVEY
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcaggggcagaagaaaacaggtctggatgcagcagtctgggcggataggcat
gcaaggggcatcaaggtttaccgtctgacgcctgtggcgttggccatggcgctgctggcg
tgccaggcgcaagcccaggttcaaggcagttcgatgccgcaggacacctcggcatcggtc
tccaccgggcaggacaatgcgcaggcagataccgagctggcagtccagcgcgtggtggca
agcgccgcacccggcatccgcagcgaactggcgcaaaccacgcagatcattgaaagcgat
gcgctgctgcagcaggtcaatgccggcaaaagcctgggcgaggcgctgggccaactggtg
cctggcgttgacctgggcggccaatcgcgcagcaacttcgggcagaacctgcgcggccgc
accatgctggtgatgctcgatggcgtgtcgctcaacagctcgcgtggcacggcgcggcaa
ctcgattcgatcgacccgttcaacatcgagcgcatcgaggtgctctcgggggccagcgcg
ctgtatggcggcggtgccacgggcggcatcgtgaacatcatcaccaagaagggcagcgca
gccggcatgcaactgggcagcgaggtcggggtgacctcgggctttcagggctcgcgcgac
caccagtacaggctcgcgcaatcgattgccggcggtaacgaccgggtgcaggcgcgcctg
ggtatcgcactgcaaaacaacggcagcttctatgatggcaagggcacaccggtacgcact
gatattgcccagacggacacgcagaacaccaagggggtggatgtgctgggcaatatgcag
atcaagatcagcccgcagcagacgctggggctgacgggccagtactaccgcaaccggttt
gatggatcgtcgtacctgtacggcggtcccaatctggcaggcatcatgggaggaaaaccg
gagctgctcgagcagcgcggcggtttcgtgagcgatgtgatgcccaagaccgagcgcgcc
ctattcaatgccgactaccacgcggcacaggtatttggcgggcaggatctgtatgtgcag
ggcttctggcggcaggaaaagctggatttcgcgccgtttccaagctcggtggtgacggca
tcgcgccagaacaccgacacctgggggctgaaggcggccctctccaagacctggggcggc
atcaatctgcgttacggcgtcgattgggaccgcgagagctttgacggagaaggcgccgtt
ttcgacacggcgcagtcccttgcatccgggggcatggtcaaccgccagatcggcaccgtg
gggcgctatgcgggctaccgggtgaacacggctgctgcctttgcgcaggcggaatggaag
ctcgatccgcagtggacgctcaacggcggcctgcgctaccagaagaccgacctcacggtc
gacgacttcgtgggttacacccagcagctgtccatgctgctgggccggggcaccagtgca
gatgccatcccgggcggcaagaacagctacaacgtcagcctgttcaatctgggcgcgcgc
tacaagatcgatgctgcacgcagcacctggctgaactatgcggaaggcttcgagctgccc
gaccctgccaagtactacggccagggcagctatgtggccaagggcgcgcactggcagctg
gtgtctgccatcgacccggaaagctctccgctcaagggtatcaagacgcgccagctggag
tggggcttcaaacaggccagcggtgcgctgcgggcacagacggcgctgttctatgcatgg
tcggaccagacgctgcagctgaacaacagcaacaacaacgtgaccatcaacgtggccgat
gaaaaacgccgcaactacggatgggaaggcgccatcgattacaccgtcgcccgtggctgg
gatgtgggtggcaatgcattgtggatccgttcggagacgcggcaaaacggcaactgggcc
aagcagagcatcatgacggcaagcccgtccaagctgtctgcctatgtgcagtggagcccc
aaccccgtgacgctgcgcctgcaggcaacgcatatgtttgcgctcaaggacgcaagcgcg
ctcaagatcgatggctttaccacggtcgatctgatgggcggcgtcaagctgccggtaggg
cgcctgaacttcgggattcagaacctgctggacaagcaatacctgaccacctggtcgcag
cgagccatggccctgtacggcacgggcgcggtctcgccgcaggcttttgccttctatggg
cgtggccgcacctttgccctcaactatgccgtggagtactga
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