Comamonas odontotermitis: LAD35_08615
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Entry
LAD35_08615 CDS
T07833
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
codo
Comamonas odontotermitis
Pathway
codo03030
DNA replication
codo03430
Mismatch repair
codo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAD35_08615 (dnaX)
03430 Mismatch repair
LAD35_08615 (dnaX)
03440 Homologous recombination
LAD35_08615 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
codo03032
]
LAD35_08615 (dnaX)
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_08615 (dnaX)
Enzymes [BR:
codo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAD35_08615 (dnaX)
DNA replication proteins [BR:
codo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAD35_08615 (dnaX)
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAD35_08615 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
DNA_pol3_tau_5
AAA_22
AAA_18
AAA_14
AAA_16
Adeno_E1B_55K_N
AAA_19
Rad17
nSTAND3
Herpes_Helicase
TsaE
SKI
PIF1
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
UBB18670
LinkDB
All DBs
Position
1849218..1851482
Genome browser
AA seq
754 aa
AA seq
DB search
MSYLVLARKYRPRNFSEMVGQEHVVQALTNALTQQRLHHAYLFTGTRGVGKTTVSRILAK
SLNCTGADGTGGITATPCGVCPACVEIDSGRFPDYTELDAASNRGVDEVQGLLEQAVYKP
VQGRFKVFMIDEVHMLTNTAFNAMLKTLEEPPEYLKFVLATTDPQKVPVTVLSRCLQFNL
RPMAPETVQEHLGRVLANENIPAETQALRLLSRAARGSMRDALSLTDQAIAFAGGQLQET
GVRQMLGAVDSSHVFRLIDALARGDGAEVVATVDQLRHQGLSAASTLEDMGVQLQRMAVL
QAVPEKAQAAVANDDAEQQEVLRLAQLMPADETQLLYSIALHGRAELGLAPDEYAALTMA
LLRLLAFKPAGAAEKKTLNSTIAAAAPQPKPPVAPVQQAQPAIKNAEPTASVSAPAPVAV
QEAAPVAAEPVAAPAMTQPKPEEPAQAVVAASAMPAAPAPLASATPAAPTAQASPASVVE
QPVAPDAAPVLASAVTPASTSVDAVRLPVRTAEDLIPARSHPAEPSVAADEEALPPEEGD
DDEDAIPVAPVDADDAPYFDDVPDEAYLDDAAPSGSAPTLPDVRAADEPPAQPGLIALPV
QAHQASDYDRPASFGDNLGRVPPEFADTPEGGFWNETVLKLIETEAITAVARQLALRSQL
IRREADCWWLRVDLETLAQPGTVERLRTALVAAGLVGRIEMSVGAVEDCPARRKAHAQQA
RQRAAEDVVRNDPYVQSLIQQFGAKIVPGSIQPL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgttctcgcccgcaaataccgtccacggaatttctctgaaatggtgggc
caggagcatgtggtgcaggcattgaccaatgccctcacccagcagcgcctgcaccatgcc
tatttgttcacgggaacgcgtggggtgggcaagacgacagtctcgcgcattctggccaag
tcgctcaattgcacgggggccgatggcacgggtggcatcacggcaaccccgtgcggcgtg
tgcccggcctgcgtcgagatcgacagtggccgctttcctgattacacggagcttgacgcc
gcctccaaccgtggcgtggatgaagtgcaaggcctgctggagcaggcggtctacaaaccc
gtgcaagggcgcttcaaggtcttcatgatcgatgaagtgcacatgctcaccaataccgcc
ttcaatgccatgctgaagacgctggaggagccgcccgagtacctgaagttcgtgctggca
accaccgatccgcaaaaggtgccggtgaccgtgctctcgcgctgcctgcagttcaacctg
cggcccatggcgcctgaaacggtgcaggagcatctggggcgcgtgctggccaacgagaat
atcccggccgagacccaggcgctgcgtcttctgtcgcgcgcagcgcgtggttccatgcgc
gatgcgctcagcctgaccgaccaggccattgccttcgccggcggccagttgcaggaaacg
ggtgtgcgccagatgctgggcgcggtcgacagcagccatgtgttccgcctgattgacgcg
ttggcgcgcggtgatggtgcggaggtggtggcaaccgttgatcagttgcgccaccagggg
ctgtcagccgcatccacgctggaagacatgggcgtgcagctgcagcgcatggccgtgctg
caggctgtgcccgagaaggcccaggctgccgttgcgaatgacgatgccgagcagcaggag
gttctgcgtcttgcgcaattgatgcctgcagacgaaacccagctgctctacagcattgcc
ttgcatggacgggccgagctggggctggcgcctgacgaatatgcagcactgaccatggcg
ctgctgcgtctgctggccttcaagcctgcgggcgcggctgaaaaaaaaactctgaatagc
acgattgctgccgccgcaccacaaccaaaaccaccggtggcgcctgtacagcaagcgcag
ccagctatcaaaaatgcagagccaacggcatctgtgtccgcacccgcacccgtggctgtg
caggaggcagcgcccgtggctgcagagcctgtcgcagcaccggctatgacccagccgaag
ccggaggagcctgcgcaggccgttgttgcagcctctgcaatgcctgctgcccccgctccg
ctcgcatccgccacgcctgccgcaccaaccgcgcaggccagccccgcttccgtggtggaa
cagcccgtcgcgcccgatgcagcgcctgtccttgcatctgcggttacacctgccagcacc
tccgtcgatgccgtgcggctgccggtacgcactgcggaagacctgattcctgcgcgctct
caccctgccgagccgtctgtcgccgcggacgaggaagcgctgccgccggaagagggcgat
gacgacgaggacgcgatacctgtggcgccggtggacgccgacgatgcaccgtattttgac
gacgtgccggatgaagcctacctggatgatgccgcgccttccggatctgcacccaccctg
cctgacgtgcgggcggccgatgagccacctgcgcagcccggcttgattgccttgcccgtg
caggcgcaccaggcaagcgattacgaccgccccgccagctttggcgacaacctgggccgg
gtgccgccggagtttgccgatacgccagaaggcggtttctggaacgagaccgtgctcaag
ctgatcgagaccgaggcgattaccgccgtggcgcgccaactggcactgcgctcgcagctc
atccggcgcgaagccgattgctggtggctgcgggtggatctggagacgctggcgcagccc
ggtacggtggagcgcttgcgcactgcgttggtggcagcgggcctcgtgggcaggatcgag
atgagcgtgggggcggtggaagactgcccggcacggcgcaaggcgcatgcacagcaggcg
cgccagcgcgcggccgaagatgtggtgcgcaatgacccctatgtccagtctctgatacag
caatttggcgcgaaaatagtgccaggcagcattcagcccctatga
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