Comamonas odontotermitis: LAD35_09450
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Entry
LAD35_09450 CDS
T07833
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
codo
Comamonas odontotermitis
Pathway
codo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAD35_09450 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_09450 (uvrB)
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAD35_09450 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LAD35_09450 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Phage_T4_Y10B
Motif
Other DBs
NCBI-ProteinID:
UBB18826
LinkDB
All DBs
Position
2027772..2029865
Genome browser
AA seq
697 aa
AA seq
DB search
MHEVTTEAARQGQFVQYPGSPFELFQPYPPAGDQPAAIDGLVEGIEDGEAFQTLLGVTGS
GKTFTMANVIARTGRPAIVFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEAYVP
QRDLFIEKDSAINEHIEQMRLSATKSVLERRDTIVVATVSAIYGIGSPESYTKMRFILRV
GDEINQRDTIAQLVRMQYKRNDMDFSRGSFRVRGDTIDVFPSEHSELAVRIELFDDEVES
IQLFDPLTGRVRQKVPRFTIYPSSHYVTPRDQVLAAVETIKEELAGRLKQLVGEGKLVEA
QRLEQRTRFDLEMLSEVGHCKGIENYSRHLSGAMPGDPPPTMTDYMPKDALLFLDESHQM
IGQLNAMYNGDKARKTTLVEYGFRLPSALDNRPLKFVEFEQRMRQVVFVSATPADYEKQH
AGKVVEQVVRPTGLVDPEVEVRPATHQVDDVLQEIHARVKVNERVLITTLTKRMAEQLTE
YLTDNGVKVRYLHSDVDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAILDAD
KEGFLRAERSLIQTIGRAARNMHGKAILYADRITDSMKRAMDETSRRRAKQMTFNEAHGI
VPRSIVKQVRDLIDGVYSTKASEEFERAEKVALQKAQVEEMSERDISKEIKRLEKEMMEA
ARNLEFEAAARARDQLTLLKQRAFGGASPEAGNTRSA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagtcactaccgaggcagcccgccagggccagtttgttcaatatccgggctcg
ccgttcgagctgttccagccttacccgcctgcaggcgaccagccggcggccatcgatggc
ctggtggagggcattgaggatggcgaagcgtttcagaccctgctgggcgtgaccggctcg
ggcaaaaccttcaccatggccaatgtcattgcccgcacggggcggcccgccatcgtgttt
gcgcccaacaagacgctggccgcgcagctgtacagcgagtttcgcgagttctttccgaag
aacgcggtggaatatttcgtcagctactacgattactaccagcccgaggcctatgtgccg
cagcgcgatcttttcatcgaaaaggacagcgccatcaatgagcacatcgagcagatgcgg
ctgtcggccaccaagagcgtgctggagcgccgcgacaccatcgtggtggccaccgtctcc
gccatctacggtatcggctcgcccgagtcgtacaccaagatgcgcttcatcctgcgcgtg
ggcgacgagatcaaccagcgcgacacgattgcgcagctggtgcgcatgcagtacaagcgc
aacgacatggatttctcgcgcgggtcgttccgtgtgcgtggcgacaccatcgatgtgttt
ccgtcggagcacagcgaactggccgtgcgcatcgagctgttcgatgatgaggttgaaagc
atccagctgtttgaccccctcacgggccgggtgcgacagaaggtgccgcgctttaccatc
taccccagcagccactatgtgacaccgcgcgaccaggtgctggcggccgtcgaaaccatc
aaggaggagctggccgggcgattgaagcaactggtgggtgaaggcaagctggtggaggcg
cagcgtctggagcagcgcacgcgcttcgatctggaaatgctgagcgaggtgggacactgc
aagggcatcgaaaactactcgcgccacctctccggggccatgccgggcgatccgccgccc
acgatgaccgactacatgcccaaggatgcgctcctgttcctggacgagagccaccagatg
atcggccagctcaacgccatgtacaacggcgacaaggcgcgcaagaccaccttggtcgag
tacggctttcgcctgcccagcgcgctggacaaccggccgctcaagttcgtggagttcgag
cagcgcatgcgccaggtggtgtttgtatcggccacgccggccgactatgaaaagcagcac
gccggcaaggtggtagagcaggtggtgcgacccacgggcctcgtcgaccccgaggtggag
gtgcgccccgcaactcaccaggtggacgatgtgcttcaggagatccatgcccgcgtcaag
gtcaatgagcgggtgctgatcacaaccctgaccaagcgcatggccgaacagctgacggag
tacctgacggacaacggcgtgaaggtgcggtacctgcactccgatgtggacacggtcgag
cgggtggagatcatccgcgacctgcgcctgggcgcatttgacgtgctggtaggcatcaac
ctgctgcgtgaaggcctggatattccggaagtatccctggtcgccatcctggatgccgac
aaggaaggctttctgcgcgccgagcgcagcctgatccagaccattggccgggcggcgcgc
aatatgcacggcaaggccatcctgtatgccgaccgcatcaccgactcgatgaagcgggcg
atggacgaaacctcgcgtcgccgggccaagcagatgaccttcaacgaagcccatggcatt
gtgcctaggagcattgtcaagcaggtgcgcgacctgattgacggcgtatacagcaccaag
gccagcgaggagtttgagcgggccgaaaaagtggctttgcagaaggcgcaggtcgaggaa
atgtccgaacgcgatatttccaaggaaatcaagcggctggaaaaggaaatgatggaagcg
gcgcgcaacctcgaattcgaggctgcggcccgggcgcgcgaccaattgaccttgctcaaa
caaagggcttttggtggggcatctccagaggcagggaatacccgcagcgcttag
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