Comamonas odontotermitis: LAD35_09780
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Entry
LAD35_09780 CDS
T07833
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LAD35_09780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
DUF460
HHH_6
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
UBB18886
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Position
2100887..2103277
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AA seq
796 aa
AA seq
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MHKIIAQIAGELKVAESQVKSAVELLDGGATVPFVARYRKEATGGLDDTQLRTLDERLGY
LRELEDRRGTVLKAIDEQGKLTDALRLAIANAPTKQELEDIYLPFKQKRRTKGQIAKEFG
IEPLADKLFADPSLDPHKEAEAFCKPATTLDDGKPGPDFSTTFAVLDGVRDILSERWAED
PSLVQKLREWLWDEGLLQSKKVEAKNENDPEVAKFRDYFEYDEPIGRVPSHRALAVFRGR
ALEILEAKLVLPVEPEPGQPSLAEGKIALHLGWSHAKRAADDLIRKCVAWTWRVKLSLST
ERDLFSRLREDAEKVAIKVFGDNLRDLLLAAPAGQRSVIGLDPGIRTGVKVAVVDSTGKL
VDTTTIYPHEPRRDWDGSLAVLAKLVEKHNINLIAIGNGTASRETDKLAADLIKIASQAD
KKIDKVVVSEAGASVYSASEFAAQEMPDIDVSLRGAASIARRLQDPLAELVKIDPKSIGV
GQYQHDVNQSELARQLDAVVEDCVNSVGVDLNTASAPLLSRVSGLSGSVAKSVVRWRDAN
GSFQNRKQLMEVAGLGAKTFEQAAGFLRIRGGDNPLDVTGVHPETYPVVEQIIVRTGKPI
GEIMGRGEVLKSLKPEQFADDRFGAVTIKDILGELEKPGRDPRPDFVVARFNDGVEDIKD
LREGMTLEGTVSNVAQFGAFVDLGVHQDGLVHVSQMSHKFIEDAREIVKTGQIVKVKVLE
VDVDRKRISLTMKLDAAPARRDGPRDNRFESAGRGNSYGGNRGGGRDSYAQPQRGNQPTQ
QGAMASAFAKLQGLKK
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagatcattgcgcagattgccggggagttgaaggttgccgaatcgcaggtgaaa
tcggcggtggaattgctcgatggcggcgccaccgtcccgttcgtcgcccgttaccgcaag
gaagccacgggcggcctcgatgacacgcaattgcgcacactggacgagcgcctgggctac
ctgcgcgagctggaagaccgccgcggcaccgtgctcaaggccatcgacgagcagggcaag
ctcaccgacgcgctgcgcctggccattgccaacgcccccaccaagcaggagctggaagac
atctacctgccgttcaagcaaaagcgccgcaccaagggccagattgccaaggaattcggc
atcgagccgctggccgacaaactgtttgccgacccctcgcttgatccgcacaaggaggcc
gaggccttctgcaagcccgccaccacactggacgacggcaaacccggccccgatttctcg
accaccttcgccgtgctcgacggcgtgcgcgacatcctctccgagcgctgggccgaagac
ccgtccctggtgcagaagctgcgcgagtggctgtgggatgaaggcctgctccagtccaag
aaggtggaagccaagaacgaaaacgaccccgaggttgccaagttccgcgactacttcgag
tacgacgagcccatcggccgcgtgccgtcgcaccgcgcgctggccgtcttccgtggccgc
gcgctcgaaatccttgaagccaagctggtgctccccgtggagcccgaacccggccagccg
agccttgccgaaggaaagatcgcgctgcacctgggctggagccacgccaagcgcgcggcc
gatgacctgatccgcaagtgcgtggcctggacctggcgcgtcaagctcagcctctcgacc
gagcgcgacctgttctcccgcctgcgtgaagacgctgaaaaagtcgccatcaaagtcttt
ggcgacaacctgcgcgacctgctgctggcagcacctgccggccagcgctctgtgatcggc
ctggaccccggcatccgcaccggcgtgaaggtggccgtggttgacagcaccggcaagctg
gtcgacaccaccaccatctatccgcacgagccccgccgtgactgggatggctcgctcgcc
gtactcgccaagctggtggaaaagcacaacatcaacctgattgccatcggcaacggcact
gccagccgcgaaactgacaaactggcagccgatctgatcaagatcgccagccaggccgac
aagaagatcgacaaggttgtggtgagcgaggcgggcgcctcggtctattcggccagcgaa
tttgccgcgcaggaaatgcccgacatcgacgtgagcctgcgtggcgcggcaagcattgcc
cgccgcctgcaggacccgctggccgagctggtcaagatcgaccccaagagcatcggcgtg
ggccagtaccagcacgatgtgaaccagagcgaactcgcgcgccagcttgacgccgtggtt
gaagactgcgtgaactccgtgggcgtcgacctgaacacggcatcggccccgttgctctcc
cgcgtctcgggcctctcgggctcggtggccaagtcggtggtgcgctggcgcgatgccaac
ggcagcttccagaaccgcaagcaactcatggaagtggcgggcctgggcgccaagaccttc
gagcaggctgcgggctttctgcgcattcgcggtggcgacaacccgctggatgtcaccggt
gtccaccccgaaacctacccggtggtcgagcagatcatcgtcagaaccggcaaacccatc
ggcgagatcatgggccgtggcgaagtgctcaagtcgctcaagcccgaacagtttgccgac
gaccggtttggcgccgtcaccatcaaggacattctgggcgagctggaaaagcccggccgc
gacccgcgccctgacttcgttgtggcccgcttcaacgacggcgtggaagacatcaaggac
ctgcgcgagggcatgacgctcgaaggcacggtcagcaacgtggcccagttcggtgccttc
gtcgacctgggcgtgcaccaggacggcctcgtccacgtcagccagatgagccacaagttc
attgaagacgcccgtgaaatcgtcaagaccggccagatcgtcaaggtcaaggtgctcgaa
gtcgatgtggaccgcaagcgcatcagcctcaccatgaagctcgacgcagcccccgccagg
cgcgatggcccgcgcgacaaccgctttgaaagcgcaggccggggcaacagttacggcggc
aatcgcggcggcggccgggacagctatgcccagccccagcgtggcaaccagcccacacag
cagggcgccatggcctctgcatttgccaaactgcaaggcctcaagaaataa
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