Comamonas odontotermitis: LAD35_09830
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Entry
LAD35_09830 CDS
T07833
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00330
Arginine and proline metabolism
codo01100
Metabolic pathways
codo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LAD35_09830
Enzymes [BR:
codo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
LAD35_09830
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UBB18895
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Position
complement(2119716..2122004)
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AA seq
762 aa
AA seq
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MFFKALDYPTVIIDSEFDSPRLRGSIIRALAEELENANQRVMANLTLDDARVAARTYLAA
SAVLISIDAHEDAEEQFRKIQDLLEDNLARHPHLPVFFYGERGSVEKVPTNLVKYARGYF
YLFEDTKSFIARQVMRAAEEYMEHLLPPFFKALIKHTAKSNYSWYTPGHAGGVAFTKSSV
GRAFHQYYGENTLRSDLSISVPELGSLLDHSGPIREAEADAARNFGSDHTFFVTNGTSTA
NKIVWHGTVARGDVVFVDRNCHKSLLHSLIMTGAIPVYFSPSRNAHGIIGPISEDQFSPK
AMQARIAQVPLAAQAMKNGAKLRIAVVTNSTYDGLCYNAEKIAKKIGSAVDFLHFDEAWY
AYAAFHPFYEHYYGMAKGKPREQDAIVFTTHSTHKLLAAFSQASMVHVRDSRKRKLDMGR
FNEAFMMHTSTSPLYPVIAACDVASKMMEGAAGESLVQEMHDESLAFRRAMLQIESDLDK
KDWWFKVWQPEPVAKQLRKSSSHIPPAQAKDWQLRPEAQWHGFDKLSDDFVMIDPIKVTL
TMPGLDMDGRMDKQGIPASVVSKFLWTRGIVVEKTNLYSLLVLFSMGITKGKWGTLVAEL
MSFKQHYEANTPLAQVLPDLVESYPQVYADTGLRDLCDRLHQFNVSHDVPKVMREMYVEQ
PDMAMIPAEAYNLLVQGKVEKVEVKKLKGRIAATMLVPYPPGIPLIMPGERYNEKADAIF
QYLQIAEEQDVQVPGFESDIHGREVEVDETGKRRYLVEVLAS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcaaagccctggactatccaaccgtcattatcgacagcgagttcgactcgccc
cgcctgcgcggcagcatcatccgcgccctggccgaagagctggagaacgcaaaccagcgt
gtgatggccaatctcacgctcgatgatgcgcgggtggctgcacgcacctatctggcagcc
tccgcagtcctgatctccatcgacgcacatgaggatgccgaggaacagttccgcaagatt
caggatctgctggaagacaacctggcgcgccacccccacctgccggtgttcttttatggc
gagcgaggttcggtggagaaggtgccgaccaacctcgtgaaatatgcgcgcggctatttc
tacctgttcgaagacaccaagagcttcatcgcgcggcaggtgatgcgtgcggccgaagag
tacatggagcacctgctgccgcccttcttcaaggcactgatcaagcacacggccaagtcc
aactactcctggtacacgccggggcatgcgggcggcgtggccttcaccaaatcgtcggtg
ggccgagccttccaccagtactatggtgaaaacaccctgcgcagcgatctctcgatctct
gtgccagagctgggctccctcctcgaccacagcggccccatacgggaggcagaggccgac
gccgccaggaacttcggctccgaccataccttcttcgtgaccaacggcacctccacggcc
aacaagatcgtctggcatggtacggtggcgcgcggcgatgtggtgtttgtggatcgcaac
tgccacaagtcactgctgcactcgctgatcatgacgggagccattcccgtgtacttctcg
ccgagccgaaatgcgcacggcatcatcgggccgatcagcgaagaccagttctcgcccaag
gccatgcaggcgcgtatcgcacaggtgccgcttgccgcgcaagccatgaaaaacggcgcc
aagctgcgcattgcggtggtgaccaactccacctatgacggcctttgctacaacgccgag
aagattgccaagaaaattggcagtgccgtcgattttctgcactttgacgaagcctggtac
gcctacgccgccttccatccgttctacgagcactactacggcatggccaagggcaagccg
cgtgagcaggatgccatcgtcttcaccacccattccacccacaaactgctggcggcgttt
tcgcaggcatccatggtgcatgtgcgtgacagccgcaaacgcaagctcgacatggggcgc
ttcaacgaagccttcatgatgcacacctccaccagcccgctgtacccggtgattgcggcc
tgcgatgtggcctccaagatgatggaaggcgctgccggtgaatcactggtgcaggaaatg
cacgatgaatccctcgcgtttcgccgcgccatgctgcagatcgaatccgacctggacaag
aaagactggtggttcaaggtctggcagcccgagcccgtggccaagcagctgcgcaaatcc
tcatcccacattccacctgcccaggccaaggactggcaactgcgccccgaagcccagtgg
cacggctttgacaagctgagcgacgactttgtcatgatcgaccctatcaaggtcaccctc
accatgcctgggctggacatggacgggcgcatggacaaacagggcatccctgccagcgtg
gtcagcaagttcctgtggacgcgcggcatcgtggtcgaaaaaaccaacctctactcgctg
ctggtgctgttctccatgggcatcaccaagggcaagtggggaaccctggtggcggaactg
atgagcttcaagcagcactacgaggccaatacgccactggcgcaggtactgcctgacctg
gtggagagctacccgcaggtctatgccgacacggggctgcgtgacctgtgcgaccgcctg
caccagttcaatgtgagccacgatgtgcccaaggtcatgcgcgagatgtacgtcgagcaa
cccgacatggccatgatcccggcagaggcctacaacctgctggtgcagggcaaggtcgag
aaggtggaagtcaaaaagctcaaggggcgcatcgcggctaccatgctggtgccctatccc
ccaggcattccactcatcatgcctggcgagcgctacaacgaaaaggcagatgccatcttc
caatacctgcagattgccgaagaacaggatgtccaggtacccggctttgagtccgacatc
catggccgcgaagttgaggtggatgaaactggcaagcgccgttatctggtggaagttctg
gcttcgtga
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