Comamonas odontotermitis: LAD35_10050
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Entry
LAD35_10050 CDS
T07833
Name
(GenBank) TIGR03915 family putative DNA repair protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
codo
Comamonas odontotermitis
Pathway
codo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAD35_10050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_10050
Enzymes [BR:
codo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LAD35_10050
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LAD35_10050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4130
Motif
Other DBs
NCBI-ProteinID:
UBB18930
LinkDB
All DBs
Position
complement(2165279..2166202)
Genome browser
AA seq
307 aa
AA seq
DB search
MRAAPYGAESGQALSVLLDAPDDFAGFRQAARALLALGAAPDGVHWRWNDTLATRAAEGD
LFADGKLSSAQDRVLTPDALDLLVPAPGRPVHIRKAQLAVLRDACCHRNPARFALCYRWL
WRVQRMPQLAGDALDADWRDLERLAHAVGREIHKMHAFVRFRPAQDASGEPLHVAWFEPE
HHIVRAASGFFMRRFTNMRWAILSPDCSVLWDLHALQWAPGATAAQAPGPDAGEALWLAY
YQSTFNPARLKEQAMLREMPRRYWKNLPETQAISALVATARSRTGHMLAAMGDDPGEGEA
AGAGEDS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccgcgccatatggagcagagagcgggcaggcgctgagcgtgctgctggacgcg
cccgatgattttgcgggctttcggcaagcggcgcgggcattgctggccctgggcgctgca
cctgacggcgttcactggcggtggaacgacacgctggccactcgcgctgcagaaggcgac
ctgtttgccgacggcaaactctcttctgcgcaagaccgggtgctgacacctgatgcactg
gatctcctggtgccagcccctggccggcccgtgcatatccgcaaggcacaactggccgtg
ctgcgcgatgcctgctgccaccgcaacccggcgcgctttgcgctgtgctaccgctggctg
tggcgcgtgcagcgcatgccccaactggcaggcgacgcgctggatgccgactggcgcgat
ctggagcgcctggcccatgccgtggggcgcgaaatccacaaaatgcacgcatttgtgcgc
tttcggcccgcgcaggatgcgagcggcgagccgctgcacgtggcctggttcgagccggag
caccacatcgtgcgcgcagcctcgggctttttcatgcggcgctttaccaatatgcgctgg
gccattctcagccctgattgcagcgtgctgtgggatctgcacgccctgcaatgggcgccc
ggcgccacggctgcccaggcgcccgggcccgatgcgggcgaggcgctctggcttgcctac
taccaatccaccttcaaccccgcgcgcctcaaggagcaggccatgctgcgtgaaatgccg
cgccgctactggaagaacctgcccgaaacccaggcgatcagcgccctggttgccacggcc
cgcagccgcacggggcacatgctggccgcgatgggcgatgacccaggtgaaggcgaggct
gctggcgctggtgaagattcctga
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