Comamonas odontotermitis: LAD35_11515
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Entry
LAD35_11515 CDS
T07833
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00061
Fatty acid biosynthesis
codo00071
Fatty acid degradation
codo01100
Metabolic pathways
codo01212
Fatty acid metabolism
codo02024
Quorum sensing
codo04146
Peroxisome
Module
codo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LAD35_11515
00071 Fatty acid degradation
LAD35_11515
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LAD35_11515
09145 Cellular community - prokaryotes
02024 Quorum sensing
LAD35_11515
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
codo01004
]
LAD35_11515
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
codo04147
]
LAD35_11515
Enzymes [BR:
codo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LAD35_11515
Lipid biosynthesis proteins [BR:
codo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LAD35_11515
Exosome [BR:
codo04147
]
Exosomal proteins
Exosomal proteins of breast milk
LAD35_11515
Exosomal proteins of breast cancer cells
LAD35_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UBB15503
LinkDB
All DBs
Position
2460232..2462085
Genome browser
AA seq
617 aa
AA seq
DB search
MTTSQGQMPDLRTIDTLPALFQYRCNTTPAREAYRWFDAPSNQWQSFSWSDMQQAVATWS
SAIGNLQLERGARIATLLTHSVHAICIDQAGLAQGCVTVPLHANDNAGNIAFILADAGAS
LLLVNRLEAWQKIAATGTPLPALRCVVVDDPNQPAIETGASGASEAGAVRIVRLQEWLQA
PAVSAVAAASQPQAEDLAAIVYTSGTTGKPKGVMLSHRNVMSDVKAVLGRVVPTQDDVFL
SFLPVSHTFERTCGYYLPMAVASTVVYARSVAQLAEDMLAVRPTILVSVPRIYERIYAKV
QEKLAGSAFKHALFAAACSKGWARHCEAHGLANKDAPQGGLARLLPWNFLQKRVAQSILD
LFGGRLRIAVTGGAAIPPVVSHSFLGLGLQLVQGFGMTETSPVLTANSLEHNDPSTVGKP
LAGMEVRIGENKELQARGPNVMVGYWNRPEDTQKAFTDDGWLKTGDQAEIIDGEVRIVGR
IKEIIVTATGEKVPPSDIEQALCADPLFEQTMVVGEHQPFIACVAVVNREEWKLLAASHG
LDPDNSVSLQAPAVCKAVLQRIENLCHGFAKYAVPRAVYLVVEPWTVDNGLMTPTLKLRR
PQLMQKYATEIAAMYAK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgagccaaggccagatgcccgatctgcgcaccattgacaccctgcccgcgctt
tttcagtaccgctgcaacaccaccccggcccgcgaggcctaccgatggttcgatgcaccc
agcaaccaatggcagtccttcagctggagcgacatgcaacaggccgttgccacatggtca
agcgccatcggcaacctgcagctcgaacgcggcgcccgcatcgccaccctgctcacccac
agcgtgcacgccatctgcattgaccaggcgggcctcgcccagggctgcgtgaccgtgccg
ctgcatgccaacgacaacgccggcaatatcgccttcatcctggccgacgcaggcgcttcg
ctgctgctcgtcaaccggctcgaagcctggcagaagatcgccgccaccggcacgccgctg
ccagccctgcgctgtgtggtggtggacgaccccaaccagcccgctatcgaaacaggagct
tctggcgcaagtgaggcaggcgccgtccgcattgttcgcctgcaggaatggctgcaggca
ccggcagtttccgctgtagcagccgcctctcagccccaggccgaagatttggctgccatc
gtgtacaccagcggcaccactggcaaacccaagggcgtgatgctgagccaccgcaatgtg
atgagtgacgtgaaggccgttcttggccgcgtggtgcccacacaggacgatgtgttcctg
tccttcctgcccgtctcccacacctttgagcgcacctgtggctattacctgcccatggcc
gtggccagcaccgtggtgtatgcgcgctcggtggcgcaactggccgaggacatgctggcc
gtgcggcccaccatcctcgtgtcggtgccgcgcatctatgagcgcatctacgccaaggtc
caggaaaagctggccggctctgccttcaagcacgcgctgtttgctgcggcctgctccaaa
ggctgggcacgccactgcgaggcccatggccttgccaacaaggatgcacctcagggtggc
ctggcgcgccttttgccctggaactttctgcaaaagcgtgtggcgcagtccattctggac
ctgtttggcgggcgcctgcgcatcgccgtcactggtggcgcagccattccgcccgtcgtg
tcgcacagtttcctgggcctggggctgcaattggtgcagggcttcgggatgaccgaaacc
tctccggtgctgaccgccaactcgctggagcacaacgacccctccaccgtgggcaagccg
ctcgcaggcatggaagtgcgcatcggcgagaacaaggagctgcaggcgcgcggccccaat
gtgatggtgggctactggaaccgccccgaagacacgcaaaaggcgtttaccgatgatggc
tggctgaaaaccggcgaccaggccgagatcatcgatggagaagtgcgcattgtcggccgc
atcaaggaaatcatcgtgaccgccaccggcgagaaggtgccgcccagcgacatcgagcag
gcactgtgcgccgatccgctgtttgagcagaccatggtggtgggcgagcaccagcccttc
attgcctgcgtggccgtggtcaaccgagaagaatggaagctgctggccgcaagccatggc
ctcgacccggacaacagcgtgagcctgcaggcccctgccgtgtgcaaggcagtgctccag
cgcatcgaaaacctgtgccacggctttgccaaatatgcagtacctcgtgccgtgtacctg
gtggtcgagccctggaccgtggacaacggcctgatgaccccgacgctgaagctgcgccgc
ccgcagctgatgcagaagtacgcgaccgagatcgcggcgatgtacgccaagtaa
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