Comamonas odontotermitis: LAD35_12275
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Entry
LAD35_12275 CDS
T07833
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
codo03016
]
LAD35_12275 (truB)
Enzymes [BR:
codo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LAD35_12275 (truB)
Transfer RNA biogenesis [BR:
codo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LAD35_12275 (truB)
Prokaryotic type
LAD35_12275 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TPR_Slam
Motif
Other DBs
NCBI-ProteinID:
UBB15647
LinkDB
All DBs
Position
complement(2631919..2632950)
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AA seq
343 aa
AA seq
DB search
MNATRTRVQRRPVHGVVLLDKPIGLSSNDALQKVKWLLRAEKAGHTGTLDPLATGVLPLC
FGAATKFSQLQLDAPKTYEALVCLGATTTTGDAEGDVVQTWELGAAERAALTAERLALVA
AQFTGDIQQVPPMYSALKRDGKALYEYARAGITVEREARAVTIYRLELAVCEDEQSFVAI
KMLVQCSKGTYVRTLAEDIGTALGAGAHLRSLRRIETGGIDLSRTVTIEQIEATPDAERL
QYALPADTLLAAHTRVMLDGDNAARFLSGLRRRGDWADAEAVAVYGDVPLGGLEANDHLP
ALLGVAHIRARELIPDRLLSPIEIQQILEGTPRPQASGILETS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccactcgcaccagggtgcagcggcgccctgtgcatggggtggtgctgctcgat
aaacccattggcctgtccagtaacgacgctttgcagaaagtgaagtggttgctgcgcgct
gaaaaggctggccacaccggtacgcttgatccgcttgcgaccggcgtgctgccgctgtgt
tttggcgcggccaccaagttcagccaactgcagctcgatgcgcccaagacttacgaggcc
ttggtgtgcctgggcgccaccaccaccaccggcgatgccgaaggggatgtggtgcagaca
tgggagctgggtgctgcagaacgcgctgccctgaccgctgaacgcctggccctggttgcc
gcgcagttcaccggcgacattcagcaggtaccgccgatgtacagcgccttgaagcgcgat
ggcaaggccctgtatgagtatgcgcgtgccggcatcactgtcgagcgcgaagcgcgcgcg
gtcaccatctatcggttggaactggctgtctgcgaagacgagcaatcgttcgttgccatc
aagatgctcgttcaatgcagcaagggcacatatgtgcgtaccctggcggaagacattggc
acggccttgggggcgggcgcacatctgcgcagcctgcgccgcatcgagaccggtggcatt
gacctctcgcgcaccgtcaccatcgagcagatcgaagcaacgcctgatgccgaacgcctg
caatatgcactgccggcagatacattgctggcggcgcacacgcgtgtcatgctcgatggc
gataatgcagccagatttctgtccggcctgcgccggcggggtgattgggcggatgcggag
gctgtcgccgtctatggcgatgtgccgctgggcggcctggaggcaaatgaccacctaccg
gcactgctgggcgtggcgcacatccgggcgcgggaactcattcccgaccggcttctcagc
cccatcgagattcaacaaattttggaaggaacgccgcgtccacaagccagcggcattttg
gaaacatcatga
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