Comamonas odontotermitis: LAD35_12380
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Entry
LAD35_12380 CDS
T07833
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00330
Arginine and proline metabolism
codo01100
Metabolic pathways
codo01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LAD35_12380
Enzymes [BR:
codo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
LAD35_12380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
WHH
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UBB15667
LinkDB
All DBs
Position
complement(2655889..2658438)
Genome browser
AA seq
849 aa
AA seq
DB search
MKFRFPIVIIDEDFRSENTSGLSIRDLAHAIEEEGFEVLGVTSYGDLSQFAQQQSRASAF
ILSVDDEEFTQGGDEDLIVRNVRDFISEVRRKNPDVPIYIYGETKTSRHLPNDILRELHG
FIHMFEDTPEFVAKHIIREAKNYLESIQPPFFKALLDYAEDGSYSWHCPGHSGGVAFLKS
PIGQMYHQFYGENMLRADVCNAVEELGQLLDHNGAIGESERNAARIFNADHCFFVTNGTS
TSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAIPVFLKPTRNHFGIIGPIHESEFS
PKTIEAKIAANPLLKGVDPKKVKPRVLTLTQSTYDGVLYNTETIKQKLDGYVDNLHFDEA
WLPHAAFHPFYGSYHAMGKKRARPKHSVVYATQSIHKLLAGISQASHVLVQDSQTQKLDF
NLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESIVEALDFRRAMRKVEDEF
GKNDWWFKVWGPHELAEEGMGRADDWIIKGKKSKSGKASSNSWHGFGELADGFNMLDPIK
STIVTPGLNLDGKFDKTGIPASIVTKYLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTML
TALQQFKDDYEKNQPMWRILPEFCQQHKVYERMGLRDLCQHVHELYAKYDIARLTTEMYL
SELTPAMKPSDAYAHIARRKTDRVEIDHLEGRVTVGLVTPYPPGIPLLIPGEVFNRKIVD
YLIFAREFSKLCPGFETDIHGLVELVDDKGEVRYYADCVALDAGDQAVQTQVISAPVAAG
KKTSPMLAGRAPAKSGKIKTEAAMKKALKAEKPVGDASVGKISPVEKAPQAAAKSTRAAK
APKPRTPKA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgctttcccatcgtcatcatcgacgaggatttccgctcggagaacacctcc
ggtctgagcatccgcgacctcgcccatgcgatcgaggaagagggcttcgaggtactgggc
gtgaccagctatggcgatctctcgcagttcgcacagcagcaaagccgcgccagtgcgttc
atcctgtcggtggatgacgaggaattcacgcagggcggcgacgaagatctgatcgtgcgc
aatgtgcgcgacttcatctccgaagtgcgccgcaagaaccccgatgtgccgatctacatc
tatggcgagaccaagaccagccgccacctgcctaacgacatcctgcgcgagctgcacggc
ttcatccacatgttcgaggacacgcccgagttcgtggccaagcacatcatccgtgaagcc
aagaactacctcgagagcatccagccgccgttcttcaaggcgctgctcgattacgcggaa
gacggctcctacagctggcactgccccggccacagcggcggcgtggctttcctcaagagc
cccatcggccagatgtaccaccagttctacggtgagaacatgctgcgcgccgacgtctgc
aacgcggtggaagagctgggccaactgctcgaccacaacggtgcaatcggcgagagcgag
cgcaatgccgcacgcatcttcaacgccgaccactgcttcttcgtgaccaacggcacgtcc
acctccaacaagatggtgtggcaccacaccgtggcgcccggggatgtggtggtggtggac
cgcaactgccacaagtccatcctgcactccatcatcatgacgggggcgattcctgtcttc
ctgaagcccacgcgcaaccacttcggcatcatcggcccgatccacgagagcgagttctcg
cccaagaccatcgaagccaagattgccgccaatccgctgctcaagggcgtggaccccaag
aaggtcaagccgcgcgtgctgacgctcacgcagtccacctatgacggcgtgctctacaac
accgaaaccatcaagcaaaagctcgatggctatgtggacaacctgcactttgacgaggca
tggctgccgcacgcggctttccaccccttctatggcagctatcacgccatgggcaagaag
cgcgcgcgccccaagcactcggtcgtgtatgccacgcagtcgatccacaagctgctggcc
ggcatcagccaggcatcgcacgtgctggtgcaggacagccagacccagaagctcgacttc
aacctgttcaacgaggcgtacctgatgcacacctcgaccagtccgcagtacagcatcatc
gccagctgcgacgtggctgccgccatgatggagccgcccggcggcactgcgctggtggag
gagtcgattgtcgaggccctggatttccgccgcgcgatgcgcaaggtggaagacgagttc
ggcaagaacgactggtggttcaaggtctggggcccgcacgagttggccgaagagggcatg
ggccgcgccgacgactggatcatcaagggcaagaagagcaagagcggcaaggccagctcc
aacagctggcacggctttggcgagctggccgacggcttcaacatgctcgatccgatcaag
tcgaccatcgtcacgcccggcctcaacctggacggcaagttcgacaagaccggcattcca
gcatcgatcgtgaccaagtacctggccgagcacggcgtggtggtcgagaagacgggcctg
tactcgttcttcatcatgttcaccatcggcatcaccaagggccgctggaacaccatgctg
accgcgctgcagcagttcaaggacgactacgagaagaaccagccgatgtggcgcatcctt
cccgagttctgccagcagcacaaggtctacgagcgcatgggcttgcgtgacctgtgccag
catgtgcatgagctctacgccaagtacgacatcgcgcgcctgacgaccgagatgtacctg
tcggagctgacgcctgcgatgaagccctcggacgcctacgcgcacattgcccgccgcaag
acggaccgcgtcgagatcgaccacctggaaggccgcgtgaccgtgggtctggtaacgcca
tacccaccgggcattccgctgttgattccaggtgaagtcttcaaccgcaagattgtcgat
tacctcatcttcgcgcgcgaattctccaaactctgccccggcttcgagaccgatatccac
ggcctcgtggagctggtggacgacaagggcgaagtgcgctactacgcggactgcgtggcg
ctggatgcgggcgatcaggccgtgcagacgcaggtgatctcggcgcccgtggccgctggc
aagaaaaccagccccatgctggcaggccgtgcgcccgccaaatccggcaagatcaagacg
gaagcggccatgaagaaggcgctgaaggctgaaaagcctgtaggcgacgccagcgtcggc
aagatctcgcctgtggagaaggctccgcaggccgctgccaagtccaccagggctgccaag
gcacccaagccgcgtacgcccaaggcctga
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