Comamonas odontotermitis: LAD35_12395
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Entry
LAD35_12395 CDS
T07833
Symbol
kdgR
Name
(GenBank) DNA-binding transcriptional regulator KdgR
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
codo03000
]
LAD35_12395 (kdgR)
Transcription factors [BR:
codo03000
]
Prokaryotic type
Helix-turn-helix
IclR family
LAD35_12395 (kdgR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_11
HTH_24
MarR
Fe_dep_repress
Dimerisation
HTH_6
HTH_Crp_2
HTH_DeoR
Rrf2
Mga
HTH_5
HTH_27
DUF4423
TrmB
HTH_36
HTH_AsnC-type
HTH_34
HTH_Tnp_ISL3
TFIIE_alpha
HTH_10
ROXA-like_wH
HTH_31
HTH_45
HTH_20
FeoC
HTH_26
HTH_29
DUF7744
B-block_TFIIIC
HTH_9
DUF5343
Motif
Other DBs
NCBI-ProteinID:
UBB15670
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Position
complement(2660367..2661149)
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AA seq
260 aa
AA seq
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MTTIQDKSDTVAAVEKAFAILECLGNRRDVSVTELAQQLALSKSSVHRLLQTLKALGYVA
QDGESELYRATLKLFELGGKALENTDLVREADEDMRRLGELTRETIHLGALDEDAIIYIH
KIESDFGLRMQSRIGRRKPLHSTAIGKVLLAHMTPSKARALLDLQPLKIFTPQTLDTAEA
VMQILPRVWKLGLAEDNEEAEPGLRCIAVPVFDRFGKVIAALSISFPTMRCDANTPERYT
ALLKAASQSISARLGWRPVE
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccatccaggacaaatccgacaccgtagctgccgttgagaaggcgtttgccatt
ctggagtgcctgggcaacaggcgtgatgtgagtgtgaccgagctggcccagcagctggcg
ctgtccaaatcgtccgtgcaccggctgctgcagacgctcaaggccctgggttacgtggcg
caggacggcgaatcggagctgtaccgcgccacgctcaagctgtttgagctgggcggcaag
gcgctggagaatacggatctggtgcgtgaggctgatgaagacatgcgccgcctgggcgag
ctgacacgcgaaaccatccacctgggcgccctggatgaagacgccatcatctacatccac
aagatcgaatcggatttcgggttgcgcatgcaatcgcggatcgggcggcgcaagcccttg
cacagcacggccatcggcaaggtactgctggcccacatgacgcccagcaaggcgcgggcg
ctgctggatttgcagccactgaagattttcacgccgcagacgctggacacggccgaggcg
gtgatgcagatcctgccgcgcgtgtggaagctcggccttgccgaagacaacgaagaagcc
gaacccggtctgcgctgcatcgccgtgccggtgttcgaccgctttggcaaggtgattgcg
gcgctgtcgatctcctttcccaccatgcgctgcgatgcgaatacgccagagcgctatacc
gcgctgctgaaagcggccagccagtcgatctcggcccggctgggctggcggccagtggag
taa
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