Comamonas odontotermitis: LAD35_13730
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Entry
LAD35_13730 CDS
T07833
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
codo
Comamonas odontotermitis
Pathway
codo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LAD35_13730 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
codo03011
]
LAD35_13730 (rpsA)
Ribosome [BR:
codo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LAD35_13730 (rpsA)
Bacteria
LAD35_13730 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
CPSF73-100_C
Motif
Other DBs
NCBI-ProteinID:
UBB15897
LinkDB
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Position
2964121..2965803
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AA seq
560 aa
AA seq
DB search
MSESFAALFEESLTRTEMRPGEVITAEVVRVEHNFVVVNAGLKSEAYVPIDEFKNDQGEI
EVQVGDFVSVAIGSIENGYGDTILSRDTAKRLASWLSLEKALESGEFVTGTTSGKVKGGL
TVLVNGIRAFLPGSLIDTRPIKDLTPYENKTLEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGSIVQGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVTAGQE
ITAKILKFDTEKNRVSLGLKQMGDDPWLGVSRRYPSSTRLFGKVTNIADYGAFVELEPGI
EGLVHVSEMDWTNKNVAPSKLVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQEFAQN
TKRGDRVKGPIKSITDFGVFVGLASGIDGLVHLSDLSWNETGEAAVRNYKKGQEVEAIVL
AVDVDRERISLGIKQLDSDAFTTFATVNDKGQIVTGKVKSVDAKGAEIDLGDDIVGYLRA
SEISQDRVEDARSVLKEGEEVTAVVINVDRKSRSISLSIKQKDHAEQQEAMASLSHQSSK
ENAGTTSLGALLRAKLDADK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgccctttttgaagagtcgttgacacgcaccgaaatgcgtcct
ggcgaagtcatcaccgctgaagtcgtgcgcgttgagcacaactttgtcgtggtgaacgcc
ggcttgaagtcggaagcctatgtgccaatcgacgaattcaagaacgaccagggcgaaatc
gaagtccaagtgggtgacttcgtgtccgtggccatcggctccatcgaaaacggctacggc
gacaccatcctgtcgcgcgataccgccaagcgtctggcctcgtggctgtcgctggaaaag
gcgctggaatcgggcgaattcgtgaccggtaccacctccggcaaggtcaagggcggtctg
accgttctggtcaacggcatccgcgcattcctgcccggttcgctgatcgacacccgtcct
atcaaggatctgaccccttacgaaaacaagaccctggaattcaaggtcatcaagctcgac
cgcaagcgcaacaacgtggtgctgagccgccgcgctgtggtggaagcctcgatgggcgaa
gagcgcgccaagctgatggaaaccctgaaggaaggctccatcgttcaaggcgtggtcaag
aacatcaccgaatacggtgcgttcgtggatctgggcggcatcgacggcctgctgcacatc
accgacatggcatggcgccgcgtgcgtcacccatccgaagtggtgaccgctggccaggaa
atcaccgccaagatcctgaagttcgacaccgagaagaaccgcgtgtccctgggtctgaag
caaatgggcgacgatccatggctgggcgtgtcgcgccgctacccatcgagcacccgtctg
ttcggcaaggtcaccaacattgccgactacggcgcgttcgtggaactggaaccaggcatc
gaaggtctggtgcacgtttccgaaatggactggaccaacaagaacgttgctccttccaag
ctcgtgtccctgggcgacgaagtcgaagtcatggttctggaaatcgacgaagacaagcgt
cgcatctccctgggcatgaagcaatgcaaggccaacccatggcaagaatttgcacagaac
accaagcgcggtgaccgcgtgaagggcccgatcaagtcgatcaccgacttcggcgtgttc
gtgggcctggcctcgggcatcgacggcctggtgcacctgtccgacctgtcgtggaacgaa
accggcgaagccgctgttcgtaactacaagaagggccaggaagtggaagccatcgtgctg
gccgtggacgtggaccgtgagcgtatctcgctgggcatcaagcagctcgacagcgacgcc
ttcaccacgttcgctaccgtgaacgacaagggccagatcgtgaccggcaaggtcaagtct
gtggatgccaagggcgctgaaatcgacctgggcgacgacatcgtcggctacctgcgtgct
tcggaaatctcccaagaccgcgtggaagacgctcgctcggtgctgaaggaaggcgaagaa
gtgaccgccgtggtgatcaacgtggatcgcaagagccgcagcatctccctgtcgatcaag
cagaaggaccatgctgagcagcaagaagccatggcttccctgtcgcaccagtcgtccaag
gaaaatgctggtaccaccagcctgggcgctctgctgcgcgccaagctggacgccgacaag
taa
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