Comamonas odontotermitis: LAD35_14220
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Entry
LAD35_14220 CDS
T07833
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00260
Glycine, serine and threonine metabolism
codo00460
Cyanoamino acid metabolism
codo00630
Glyoxylate and dicarboxylate metabolism
codo00670
One carbon pool by folate
codo00680
Methane metabolism
codo01100
Metabolic pathways
codo01110
Biosynthesis of secondary metabolites
codo01120
Microbial metabolism in diverse environments
codo01200
Carbon metabolism
codo01230
Biosynthesis of amino acids
codo01240
Biosynthesis of cofactors
codo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LAD35_14220
09102 Energy metabolism
00680 Methane metabolism
LAD35_14220
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LAD35_14220
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LAD35_14220
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LAD35_14220
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LAD35_14220
Enzymes [BR:
codo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LAD35_14220
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
UBB15985
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Position
3084478..3085722
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AA seq
414 aa
AA seq
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MYHRNILVEQTDAELFAAIQAENQRQEQHIELIASENYASPAVMWAQGTQLTNKYAEGYP
GKRYYGGCEYVDIAEKLAIDRVKELFGAEAANVQPHCGASANEAVFLAFLKPGDTIMGMS
LAEGGHLTHGMPLNISGKWFNVVSYGLNEKEELDYDAMEKKAHETKPKLIIAGASAYSLS
IDFARFAKVAKDVGAIFMVDMAHYAGLIAAGEYPNPVPHADVVTTTTHKSLRGPRGGVIL
MKAEHEKAINSAVFPGLQGGPLMHVIAAKAVAFKEALQPEFKQYAQQVKTNARIVAETLT
QRGLRIVSGGTQSHVMLVDLRAKGITGKEAEAVLGAAHMTINKNSIPNDPEKPMVTSGVR
IGTPAMTTRGFKDEEARLTANLIADVLDNPRDEANIAAVRAKVNELTARFPVYR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaccgtaacattcttgtcgaacagaccgacgccgaactctttgcggccatccag
gccgaaaaccagcgccaagaacagcacatcgagctgatcgccagcgaaaactatgcatcg
cccgccgtgatgtgggcccagggcacccagctgaccaacaagtacgcagaaggctatccc
ggcaagcgttactacggcggctgcgagtatgtggacattgccgagaagctggccatcgac
cgcgtcaaggaactgtttggcgcagaagccgccaacgtgcagccccattgcggcgcctcg
gccaatgaagccgtgttcctcgccttcctcaagcccggcgacaccatcatgggcatgagc
ctggccgaaggcggccacctgacgcacggcatgccgctcaatatttcgggcaagtggttc
aacgtggtctcctacggcctcaatgagaaggaagagctggactacgacgccatggagaag
aaggcgcacgagaccaaacccaagctgatcattgccggtgcttcggcctactcgctgtcc
atcgacttcgctcgctttgccaaggtcgccaaggacgtgggcgccatcttcatggtggac
atggcccactacgccggcctgattgccgctggcgagtaccccaaccctgtgccccacgcc
gatgtggtgaccaccaccacccacaagagcctgcgcggcccccgtggcggtgtgatcctg
atgaaggccgagcacgaaaaggccatcaacagcgccgtgttccccggcctgcagggcggc
ccgctgatgcacgtgatcgcagccaaggccgtggccttcaaggaagcgctgcaacccgag
ttcaagcagtacgcccagcaggtcaagaccaatgcccgcatcgtggctgaaacgctgacc
cagcgtggcctgcgcatcgtctccggcggcacgcaaagccatgtgatgctggtcgatctg
cgcgccaagggcattaccggcaaggaagcagaagccgtgctgggcgcagcccacatgacg
atcaacaagaactccatccccaacgaccctgaaaagccgatggtgaccagcggcgtgcgt
atcggcacccccgcgatgacgacccgtggcttcaaggacgaggaagcgcgcctcacggcc
aacctgattgccgacgtgctggacaacccgcgcgatgaagccaacatcgccgccgtgcgc
gccaaggtgaacgagctgaccgcccgcttccctgtgtatcgctga
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