Comamonas odontotermitis: LAD35_14935
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Entry
LAD35_14935 CDS
T07833
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
codo03009
]
LAD35_14935 (rimO)
Enzymes [BR:
codo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LAD35_14935 (rimO)
Ribosome biogenesis [BR:
codo03009
]
Prokaryotic type
ribosomal protein modification factors
LAD35_14935 (rimO)
BRITE hierarchy
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Paralog
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Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
DUF668
Motif
Other DBs
NCBI-ProteinID:
UBB16111
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Position
complement(3248865..3250277)
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AA seq
470 aa
AA seq
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MTETITPANSVPGTAKVPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIV
NTCGFIDDAVKESLDTIGEALAENGKVIVTGCLGAKTGENGGNMVKQMHPSVLAVTGPHA
TQEVMDAVHTNLPKPHDPFIDLVPGSFGEAGIKLTPKHYAYLKISEGCNHRCTFCIIPSM
RGDLVSRPIGDVLKEAKALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLEL
VQTLGELAKPYGAWVRLHYVYPYPTVDAILPLMAQGLVLPYLDVPLQHSHPDVLRRMKRP
ASGEKNLERIMEWRKICPELVIRSTFIAGFPGETEEEFEHLLDFIREAEIDRAGCFAYSP
VDGATANDLPGMLPQEVREARRARFMEVAEEVSAKRLERRVGQTMQVLVDKSIGLGKKGG
VARTYADAPEIDGVVHLMPPEKASKTYKVGELIKVRILRSQGHDLVGIPV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaccatcacccccgcgaactccgtccccggcacagccaaggtccccaaagtg
ggcttcgtgtcgttgggctgccccaaggcactgaccgacagtgaattgatcctgacgcaa
ttgagcgcagagggctaccagacttccaagaccttcgagggcgcagatctggtgatcgtg
aacacctgcggtttcatcgacgacgctgtcaaggagagcctggacacgattggcgaggcg
ctggccgagaatggcaaggtgattgtgaccggctgcctcggcgcgaagacgggcgagaac
ggcggcaacatggtcaagcaaatgcaccccagcgtgctggcggtgaccgggcctcacgcc
acgcaggaggtgatggatgcggtgcacacgaatctgcccaagccccatgaccctttcatc
gatctggtgcctggcagctttggcgaagccggcatcaaactcacgcccaagcactacgca
tatctgaagatcagcgagggttgcaaccaccgctgtactttctgcatcatcccgtcgatg
cggggcgacctggtcagccgcccgatcggcgacgtgctcaaggaagccaaggcgctgttt
gaaggcggtgtgaaggagttgctggtgatcagccaggacacctctgcctatggcgtggat
gtgaaataccgcacgggcttctgggatggaaaacccgtcaagacccgcatgctggagctg
gtgcagacgctcggtgagctggccaagccctatggcgcctgggtgcgcctgcactatgtc
tatccttatccgaccgtcgacgccattctgccgctgatggcgcagggtctggtactgcct
tacctggatgtgcccctgcagcacagccaccctgatgtattgcggcgcatgaagcgcccc
gccagcggtgaaaagaacctcgaacgcatcatggagtggcgcaagatctgccctgaactg
gtgatccgctccactttcattgcaggctttccgggcgagaccgaagaagagttcgagcac
ttgctggatttcatccgcgaggccgagatcgaccgcgctggctgttttgcctacagcccg
gtggacggtgcgaccgccaacgacctgcccggcatgctgccgcaggaggtgcgcgaggcg
cgccgcgcccgtttcatggaagtagccgaagaggtgtctgccaaacgtctggagcgccgc
gtgggccagaccatgcaggtgctggtggacaaatctatcggtctgggcaagaagggtggc
gtggcccgcacctatgccgatgcacctgaaatcgatggcgtggttcacctgatgccgcca
gagaaggcaagcaagacctataaggtgggcgagctgatcaaggtgcgcatcctgcgcagc
caggggcacgatctggtgggcatccccgtctaa
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