Comamonas odontotermitis: LAD35_16330
Help
Entry
LAD35_16330 CDS
T07833
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
codo
Comamonas odontotermitis
Pathway
codo03030
DNA replication
codo03410
Base excision repair
codo03420
Nucleotide excision repair
codo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAD35_16330 (polA)
03410 Base excision repair
LAD35_16330 (polA)
03420 Nucleotide excision repair
LAD35_16330 (polA)
03440 Homologous recombination
LAD35_16330 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
codo03032
]
LAD35_16330 (polA)
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_16330 (polA)
Enzymes [BR:
codo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAD35_16330 (polA)
DNA replication proteins [BR:
codo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LAD35_16330 (polA)
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LAD35_16330 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAD35_16330 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UBB16365
LinkDB
All DBs
Position
complement(3540817..3543612)
Genome browser
AA seq
931 aa
AA seq
DB search
MSNPPTLVLVDGSSYLYRAYHAMPDLRAVPGDPASPATGAIRGMVNMMQALRKDVQADYA
VCVFDTSGPTFRDHLYTEYKATRSPMPDDLRSQIEPIHEVVKLLGWKVVAVPGVEADDVI
ATLAQTAAAQGIQVIVSSGDKDLSQLVNEHVTIIDTMNGKKRDVAGVTAEFGVPPSLMVD
YQALVGDTVDNVPGVAKVGPKTAAKWLEEHGSLDNLIANAASIKGVAGQNLRDAIASGQL
ALSRQLVTMKTDCDLAAHIVGLPQLDGITLAEPDSAGLAPFYEKYGFKGLARALGAAAAG
TSSSKTENAQSGLFDANDAETTEIAINAQQRDVVYHTILTETDLDAWIAKIQAAELTAID
TETDSLDEMVARIVGISFSVAIGEAAYIPLRHEGLDVPEQLPLDAVLTKLKPWLEDASRK
KLGQHVKYDQHVFANHGVTVRGYAHDTMLQSYVLEADRPHNLTSLALRHTGRTGISYEDL
CGKGKSQIPFAQVAVDKAAAYSCEDSDQTLNVHEVLWPRIQANAGLLHIYELEMQTSEAL
FRIERNGVSIDAGELARQSNELGTRILQLENEAYDIAGQQFNLSSPKQLGEIFFDKLGLP
VVKKTATGARSTDEEVLEKLAEDYPLPAKILEHRSLSKLKGTYTDKLAQMALPSDGRVHT
HYAQAVAVTGRLSSNDPNLQNIPVRTPEGRRIREAFVAPEGKLIASADYSQIELRIMAHL
SGDEALLNAFRDGLDVHRATASEVFGVPVDQVSSEQRRYAKVINFGLIYGMSSFGLAKNL
GIETKAAAAYIDKYFQRYPGVKRYMDQTVELAHAQGYVETVFGRRLVLPEINGGNGPRKK
AAERAAINAPMQGTAADLIKKAMVAVQAKLDQEKPGVLVIMQVHDELVFELPAAEQDWVK
AEIPALMAGVAELKVPLLAEIGFGPNWEKAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcctcctactttagtgctggtggacggttccagctacctgtaccgtgcctac
cacgccatgcccgatctgcgtgccgtgcccggcgaccctgccagcccggcaacgggcgcc
attcgtggcatggtcaacatgatgcaggccctgcgcaaggatgtgcaggcggactatgcc
gtctgcgtgttcgacacgagcggcccgaccttccgggatcatctgtataccgagtacaag
gccacgcgctcgccgatgccggacgacctgcgcagccagatcgagccgatccacgaagtg
gtgaagctgctgggctggaaggtggtggccgtgccgggcgtggaggccgacgatgtgatc
gccacgctggcgcagacggccgccgcgcaaggcatccaggtgattgtctccagcggcgac
aaggatctgagccagctggtgaatgagcatgtcaccatcatcgacacgatgaacggcaag
aagcgcgacgtggcaggcgtgaccgcagagttcggggtgccgccatccctgatggtcgat
taccaggcgctggtgggcgataccgtggacaacgtgcccggtgtggccaaggtcggcccc
aagacggccgccaagtggctggaagagcacggctcgctggacaacctcattgccaatgcc
gccagtatcaagggcgttgcggggcagaacctgcgagacgccatcgcctcgggccagttg
gcgctgagccgccagttggtgaccatgaagaccgactgcgacctggccgcgcacattgtg
ggtttgccgcaactcgacggcatcaccctcgccgagccagacagtgcagggcttgcacct
ttctacgaaaaatacggtttcaagggcctggcgcgcgcgctcggcgcggcggccgctggc
acgtcttcgtccaaaacggaaaatgcccagagcggcctttttgatgcgaacgatgccgaa
accaccgagatcgccatcaacgcccagcaacgcgatgtggtctaccacacgatcctgacc
gagacggacctggatgcctggatcgccaaaattcaggcagccgaactgaccgcaatcgat
accgaaaccgattcgctcgatgaaatggtggcccggatcgtgggcatcagcttcagcgtc
gccattggcgaggccgcctatattccgctgcgccacgaagggctggacgtgcctgagcaa
ttgccgttggatgcggtattgaccaagctcaagccctggctggaggatgccagcaggaag
aagctgggacagcacgtcaaatacgaccagcatgtgtttgccaaccacggcgtcacggtg
cgaggctatgcccacgacaccatgctgcaaagctatgtgctggaggcggaccgcccccac
aacctgaccagccttgcgctgcgtcacacagggcgcaccggcatcagctacgaagacttg
tgcggaaagggcaaaagtcagattcccttcgcccaggtggctgtcgacaaggctgctgcg
tacagctgcgaggattccgaccagaccctgaacgtgcacgaggtgctgtggccgcgcatc
caggccaacgccggcctgctgcacatctacgagttggagatgcagaccagcgaagcgctg
ttccgcatcgagcgcaatggcgtgagcattgacgcgggcgagctggcgcggcagagcaac
gagttgggcacgcgcattctgcaactagaaaacgaggcctacgacatcgccggccagcag
ttcaacctgagcagccccaagcagctgggcgagatcttttttgacaagctgggcttaccc
gtggtcaagaaaaccgccaccggcgcgcgcagtaccgacgaagaagtgctggaaaagctg
gccgaagactatccgctgcccgccaagatcctggagcaccgttcgctctccaagctcaag
ggcacctataccgacaagctggcccagatggccttgccaagcgatggccgggtgcatacc
cactatgcgcaggccgtggcggtaacgggtcgcctgtccagcaacgacccgaatctgcag
aacattcccgtgcgcacccccgaagggcgccgcatccgcgaagcctttgttgcgcccgag
ggcaagctcattgccagtgccgactattcgcagatcgagctgcgcatcatggcccacctc
tcaggtgacgaggccttgctcaacgcgttccgcgacgggcttgacgtgcaccgggccacc
gcgtccgaggtgtttggcgtgccggtcgatcaggtcagcagtgagcagcgccgctatgcc
aaggtcatcaatttcgggctgatctatggcatgagcagctttggtcttgccaagaacctg
ggcatcgaaaccaaggctgctgccgcctacatcgacaaatacttccagcgctaccctggc
gtgaagcgctacatggaccagaccgtggagctggcgcatgcgcaaggctatgtggaaacc
gtgttcggacgccgtctggtgctgccagagatcaacggtggcaacggtccgcgcaagaaa
gcagccgagcgtgccgccatcaatgcgcccatgcagggcacggcagccgatctgatcaag
aaggccatggtggcggtgcaggccaagctggaccaggaaaagcccggtgtcctggtcatc
atgcaggtgcatgacgaactggttttcgagctgcctgccgccgagcaggattgggtcaag
gccgagattccggccctcatggccggtgtggcagagctgaaggtgccattgctggcagaa
atcggctttgggccgaactgggaaaaggcccattga
DBGET
integrated database retrieval system
