Comamonas odontotermitis: LAD35_16355
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Entry
LAD35_16355 CDS
T07833
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
codo
Comamonas odontotermitis
Pathway
codo03420
Nucleotide excision repair
codo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LAD35_16355
03430 Mismatch repair
LAD35_16355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_16355
Enzymes [BR:
codo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LAD35_16355
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LAD35_16355
MMR (mismatch excision repair)
Other MMR factors
LAD35_16355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UBB16370
LinkDB
All DBs
Position
complement(3547769..3550237)
Genome browser
AA seq
822 aa
AA seq
DB search
MDSNDLFAAPPAPASAHLPLLNGLNEEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWL
LQTGRATPGGILAVTFTNKAAKEMLTRLSAMLPINVRGMWIGTFHGLCNRMLRAHHKSAN
LPQTFQILDTQDQLSAVKRLCKQFNVDEESLPPKQLQYFISGCKEEGLRPADVQARDMAE
RKKVELYQLYEEQCQREGVVDFGELMLRSYELLRDNAPIRQHYQHRFRHILVDEFQDTNR
LQYLWLKQLAGDVVGGRFESSSSVIAVGDDDQSIYAFRGARVGNMQDFVREFDVRQQIKL
EQNYRSYSNILDSANALISHNSHRLGKNLRTDQGPGEPVRVSESVTDLAEAQWMVDEIKS
LVKSDDVARSEIAVLYRSNAQSRILETSLFNAGVPYRVYGGLRFFERAEIKHALAYLRLL
ENPHDDTSFMRVVNFPPRGIGARTTEQLQEGAQAAGCSLYDAVTAVAGKAGTKLQAFVAL
IDVLREETQGKTLRETIEKMLQASGLIEHYQTEKEGADRIDNLGELVTAAESFVTQEGFG
KDAVAIPLDEQEAMGIPGAGQSPVSQGLNPDAPVLDTPLPNARPDAGNAQMINPDTGETL
SPLVAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIAGLEEGLFPHENAMSD
MGGLEEERRLMYVAITRARKRLYLSTSQTRMLHGTTRYNVRSRFLDELPEEALKWLTPRH
SGFGSGMGSLAFGSGSGSARGAGAGSWNAESSMSMWGKTPIPAQKAEPAHGIKVGIQVFH
NKFGEGKVLAVEGTGDDARAQVHFPRHGTKWLALSVAKLTVV
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaatgatttgtttgccgccccgcctgcgcccgcttccgcacacctgccactg
ctcaatgggctcaatgaagagcagctcgccgccgtcaccctgcctgccggccacgcgctg
atcctggctggcgctggctccggcaagacgcgcgtgctcactacccgcattgcctggctg
ctgcagacaggccgcgccacgccgggtggcattctggctgtcacctttaccaataaggcg
gccaaggaaatgctcacgcgcctgtctgccatgctgccgatcaatgtgcgcggcatgtgg
attggcacattccacggcctgtgcaaccgcatgctgcgtgcgcaccataaatcggccaac
ctgccgcaaacctttcagattctcgacacgcaggatcagctctcggcggtcaagcgcttg
tgcaagcagttcaatgtcgacgaggaatcgctgccgcccaagcaactgcagtatttcatc
agtggctgcaaggaagagggcctgcgcccggccgatgtgcaggcgcgcgacatggcagag
cgcaagaaggtggagctgtaccagctgtacgaagagcagtgccagcgcgaaggtgtggtt
gattttggcgagttgatgctgcgcagctatgagctgctgcgcgacaacgcaccgatccgc
cagcattaccagcaccgtttccgccatatcctggtggacgagttccaggatacgaaccgg
ctgcagtacctgtggctcaagcaactggctggcgatgtggtgggtgggcgctttgagtca
agcagcagcgtgattgctgtgggcgacgacgaccagagcatctatgccttccgtggtgcg
cgcgtgggcaatatgcaggatttcgtgcgcgaattcgatgtgcgccagcagatcaagctg
gagcagaactaccgcagctacagcaacatcctcgattcggccaacgccctcatcagccac
aacagccaccgcctgggcaagaacctgcgcactgatcaggggccgggcgagccggtgcgg
gtgtcggagagcgtgaccgatctggccgaggcgcagtggatggtggacgagatcaagtca
ctggtcaaaagcgacgatgtggcgcgcagcgagattgccgtgctctaccgcagcaatgcg
caaagccggattctggaaaccagcctgttcaatgcaggcgtgccttaccgggtgtatggg
ggcctgcgctttttcgaacgggccgaaatcaagcacgcgctggcctatctgcgacttttg
gaaaacccgcacgatgacaccagcttcatgcgagtggtgaattttccgccacgcggcatt
ggtgcgcgcaccaccgagcagttgcaggaaggcgcgcaggcggcaggctgctcgctgtac
gacgcggtgacagccgtggcgggcaaggcgggcaccaagctgcaggcttttgtggcgctg
atcgatgtactgcgcgaagaaacccagggcaagaccttgcgtgagacgatcgagaagatg
ctgcaggccagtggcctgatcgagcactaccagacggaaaaggaaggtgccgaccgcatc
gacaacctgggtgaactggtgacagctgccgagagctttgtcacgcaggagggttttggc
aaggatgccgtcgcgattccgctcgacgagcaggaggccatgggcattccgggtgcgggc
cagagcccggtgagccagggcctgaacccggatgcgccggtactggacacgccactgccg
aatgcgcggcccgatgcgggcaatgcgcagatgatcaaccccgacaccggcgagaccttg
tcgccgttggtggcctttttgacgcacgctgcactggaggcgggcgacaaccaggcacag
gccgggcaggacgccgtgcaactgatgaccgtacacgccagcaaggggctggagtttgac
gctgtgttcatcgcaggcctggaagagggcctgtttccccatgaaaacgcgatgagcgac
atgggcgggctggaggaagagcgccgcctgatgtatgtggcgatcacccgtgcgcgcaag
cgcctctacctctccacatcgcagacgcgcatgctgcacggcaccacgcgctacaacgtg
cgcagccgctttctggacgaactgcccgaagaagcgctcaaatggctcacgcccaggcac
tcggggtttggcagcggcatgggcagccttgcctttggctccggatcgggcagcgcacgt
ggggcgggtgctggcagctggaatgcagagtcatcgatgagcatgtggggcaagacaccg
atccctgcccaaaaggccgagcccgcgcatggcatcaaggtgggcattcaggtgtttcac
aacaagttcggcgaaggcaaggtgttggcggtggaaggcacaggcgacgatgcgcgcgcg
caggtgcattttccgcgccatggcaccaagtggctggcgctgtcggttgccaagctcacg
gtggtgtag
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