Comamonas odontotermitis: LAD35_16645
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Entry
LAD35_16645 CDS
T07833
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
codo03009
]
LAD35_16645
Enzymes [BR:
codo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LAD35_16645
Ribosome biogenesis [BR:
codo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LAD35_16645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Ubie_methyltran
MTS
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
GCD14
Motif
Other DBs
NCBI-ProteinID:
UBB16423
LinkDB
All DBs
Position
complement(3606291..3607562)
Genome browser
AA seq
423 aa
AA seq
DB search
MHPKALLDACAELVAQVLTFEHPADAVVSRYFRDHRNLGPRERATLAETAYTVLRKKTLF
ETLARSGSGARERRLAILGFAGPRSFVKSALNPAEVKWLDECDAITPDSLMPQHRHNLPE
WLVEPLQAQVGDQFEQLAASMLEMAPLDLRANALSTKRADLQKELKAVGIAAEPTPYSPW
GLRVADKPALSRLEAFQKGRVEVQDEGSQLLALLLDAKRGEMVTDFCAGAGGKTLAIGAS
MRSTGRLYAFDVSAHRLEALKPRLARSGLSNVHPAAIAHERDERIKRLAGKMDRVLVDAP
CSGLGTLRRNPDLKWRQSQKAIDELTVKQAAILGSAARMVKSGGRLVYATCSILPAENEA
IAEAFAAAHPDFVPLDAGELLIGLKVENAASLCSGGDTGSQYLRLWPHLHQTDGFFAAVW
QRK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcatcccaaagccttactagatgcctgcgccgagctggtggcgcaggtcctgactttt
gaacacccggcagatgccgtggtgtcgcgatatttccgagaccaccgcaacctgggcccg
cgcgagcgggccaccctggccgagacggcctatacggtgttgcgcaagaaaaccctgttt
gagacgctggcccgctcgggcagcggcgcgcgtgagaggcgcctggcaatcctcgggttt
gccggcccgcgcagctttgtcaaaagcgcactcaatccggccgaggtgaaatggctcgat
gaatgtgacgccattacgcctgacagcctgatgccgcagcaccgtcacaacctgcccgaa
tggctggtggagccactgcaggcacaggtgggcgaccagttcgagcaactggccgctagc
atgctggagatggcgccgctcgacctgcgcgccaatgcgctcagcaccaagcgcgccgac
ctgcaaaaggagctgaaggccgtcggcattgccgcagagcccacgccatattcgccctgg
ggcctgcgcgtggctgacaagccagcgctctcgcgcctggaggcctttcaaaagggtcgg
gtggaggtgcaggacgaaggctcgcaactactggcattgctgctggatgccaagcgtggc
gagatggtgaccgacttctgcgcgggcgctggcggcaagacgctggccattggcgcctcc
atgcgcagcactgggcgcctgtatgcgtttgacgtgtcggcccaccggctggaggcgctc
aagccgcgcctggcccgctcgggactgtcgaacgtgcaccctgccgccattgcgcacgag
cgtgacgaacgcatcaagcgcctcgcaggcaaaatggaccgcgttctggtggatgcacca
tgctcaggccttggcaccctgcgccgcaacccggacctcaagtggcgccaaagccagaag
gccatcgacgaattgaccgtcaagcaggcggccatcctgggcagtgctgcacgcatggtc
aaaagcggcgggcgtctggtgtatgccacctgtagcatcctgcctgctgaaaacgaggcc
attgccgaggcgtttgctgctgcccaccccgattttgtgccgctggatgcgggtgaactg
ctcatcggcctgaaggtggagaatgccgccagcctgtgcagcggcggtgacaccggcagc
cagtacctgcgtctgtggccgcatctgcaccagacggatggcttctttgccgcagtgtgg
caaagaaaatag
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