Comamonas odontotermitis: LAD35_17920
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Entry
LAD35_17920 CDS
T07833
Name
(GenBank) pilus assembly protein PilC
KO
K02674
type IV pilus assembly protein PilY1
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
codo02044
]
LAD35_17920
02035 Bacterial motility proteins [BR:
codo02035
]
LAD35_17920
Secretion system [BR:
codo02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LAD35_17920
Bacterial motility proteins [BR:
codo02035
]
Pilus system
Pilus assembly proteins
LAD35_17920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
VWA_2
DUF4148
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
UBB16647
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Position
3885212..3888868
Genome browser
AA seq
1218 aa
AA seq
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MSIDLPQKRRFRKNVLALAVSAALAPHAGWAIDIATAPPGTKQPYVAPNVILSLDDSGSM
ESKDMANGTKTRTQVLKEALSAVFNDMTLLPDGKIRFAWQSMNRHGGPTSEALLGTAAAA
ANISPITTNNINFMRPLQGDHRANFLNYVTAYTSPGGTPTHPMMQRADEYMRGAMNRNGP
WATTPGQGNGEYLACRRNYHILFTDGGWNASYVATSPVNYDGTSRTLADGIFYDPTSVNT
RVYKDMDPMTTIADWAFRSWATPLQNPTNPLFGGTTVQPSNKYTSAPASETFTNRVTHTT
ATIPKYWNPRYDPATWPHMQTYTIGFTANAIPLYNFASDDVSVAKVSNVTAPSATLPYGF
DGSFADYANGTYVWRASGNTMSDSRTTKVDRGHDMWHAALNGRGGFYAVTQANDLKKAFE
DIIDKINTANEAQTTATAASGTSAARIDVGTFTARYEPQKAWKGSVSSATVNKDGTATAG
WSGKTTADLLDAMAPTSRVILSWSDKWTTGTNVNNVASLSFNKGGVPFKWASDESNLSTP
QKAKLGLDTATPVATSGQDILEYIRGVRSNEATTGPFRTRQSAQGDIVNSGIWYTGAPAQ
SYALQGYDSFVRAQKSRTPMIYVGGNDGMLHGFSATDGTEKIAYVPNGVLSKLKDLADPN
YSHKYYVDGSPMTGDVELGGVVAPVGGTSYYQTDWRTLLVGTLGSGGRGYFVLDVTNPVS
ASSSIAPAFGDTAALAQKLVRLDRTRGQADTLDCTTVTDTAQNSACLRMASEDADIGHIT
AQPVLNETDPLQTTQITRTNNGRWATILGNGYNSSNQRPVLLVQYLDGAQELLRIPATAD
TAGNGNAKDNGLSAPRLVDLNGDGRVDIAYAGDNLGNLWKFDLTSETVTANADGVVTAGW
GVAFGGQPLFTALAPAALNGARTTTPSDTNRQPITAPPTVRANDRQTGGAVPGTTKALGG
MMVAFGTGRNIATDDPIDKKVQTLYAVLDNTRYTIDHTNGTKQWLKVAAATTCPTPPGEC
LEVPAPRTVSMANLVKRQITAASVGTSLGAGRVDEDSGNPLYNASGLWIAGKQGWYMDLP
EVGERLLKSLELYDGSNVLLAYTQVPAKGSVDSATATNVESCNPITVDDERQYRTMLNIM
DGKRPTMQLIDVAGNGSYSNADNDNASRRQVSKGGHNVIASSDTRTKDIGTCPPGTICTD
EILRAPEQSLRPSWRKVK
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcgatctcccccaaaaaagacgtttcagaaaaaatgtgctggccctggctgtt
agcgccgccttggcccctcacgcaggttgggccattgacattgcgactgcaccgccgggc
accaagcagccatatgtggcgccgaatgtgattctgtcattggatgattctggcagtatg
gaatccaaggacatggctaatggtacaaaaactcgcacccaggtactgaaagaagcctta
tccgccgtatttaacgacatgacgttgctgcctgatggaaaaatccgctttgcatggcag
tccatgaatagacacggcggtccgacttctgaggcattgctgggcacggcagcagccgcg
gcaaatatatcgcccattacgaccaataacattaactttatgcgtccattgcagggagac
catagagctaattttcttaactacgtcactgcttacacatctcccggcggcacaccaacg
cacccaatgatgcagcgtgcggatgagtatatgcgtggagccatgaaccgaaatggtccc
tgggcgacaacccctggccaaggcaacggtgaatacttggcttgccgccgaaattaccac
attctgttcactgacggtggctggaacgcaagttatgtagcgacttcgcctgttaattac
gatggtacaagccggaccttggcagatggtattttctatgatcctacttctgtcaatacc
cgtgtgtacaaggatatggatccgatgacaacgattgcggattgggcctttagaagctgg
gcgacgccgttgcagaatcctaccaatccactatttgggggaactaccgtacagccttcc
aataaatatacaagtgcaccggcatcagagacattcaccaacagggtcacccatacaact
gcgacgatacctaagtattggaatccgcgctatgacccggccacctggccacatatgcaa
acctataccattggctttactgccaatgcaattcctctttataactttgcttctgacgat
gtatcggttgcgaaagtgagcaatgtcactgctccttcggccacactgccatatgggttt
gacggcagctttgcggactatgcgaacggcacttatgtttggcgcgcctccggcaacacc
atgagtgacagccgaactacaaaagtcgatcggggccacgacatgtggcatgccgcgctt
aatggcagaggtggcttttatgcggtcactcaggctaatgacttgaaaaaggcttttgag
gacattatcgacaaaatcaatactgccaacgaagctcaaactaccgctaccgccgccagc
ggtaccagtgcggctcgcatagacgttggtacctttaccgcccgctatgagccccaaaag
gcttggaagggctctgtttcatccgcaacagttaacaaggacggcactgccacggccggc
tggagcggcaagaccactgccgatttgcttgatgccatggcgccaaccagtcgtgtcatt
ttgagctggagtgataaatggacgactggcacaaatgtgaataatgtggcctctctgtcc
ttcaataaagggggcgttcctttcaagtgggctagtgatgagagcaatctgagtacgccg
caaaaggctaagctgggcttggatacagccacacccgtcgctaccagtggacaagacatt
ctcgaatacattcgcggtgtacgcagcaatgaggcgacaacgggcccattccgaacacgg
caaagtgctcagggcgacatcgtcaattccggcatttggtacacgggcgcccccgctcaa
agctatgcattacaagggtatgacagctttgtgcgtgcacaaaaaagccgcaccccgatg
atttatgtgggtggcaacgatgggatgttgcatggcttttctgccactgatggcaccgag
aaaattgcttatgtacccaatggcgtgctgtcaaagctcaaagatttggcagatcccaat
tattcccataagtactatgtagatggctcgccgatgacaggcgatgtggagttgggcgga
gtggttgcaccagttggcggaaccagttactaccagacagactggcgcaccttgctggtg
gggacactagggtcgggtggtaggggttattttgtgctcgacgtgaccaatcccgtttcc
gccagtagttccatagcgccggcttttggcgatacggccgccttggctcaaaagttggta
cggcttgaccggacacgaggtcaagccgatacgcttgattgcactaccgttactgatact
gcgcaaaattccgcctgtttgagaatggcaagtgaagatgcagatattggccatattact
gcccagcccgtgctgaacgagactgatccattgcaaactacccagatcacccgcacaaat
aatggtcgctgggcgacgatactgggcaatggctacaacagttcaaaccaacgcccagtt
ttgcttgtgcagtatctcgatggcgcacaggagctgctgcgtattcctgcgaccgcagat
actgcgggcaacggtaatgccaaggacaatggattgtcagcacctcgcttggtcgacttg
aatggcgacggtcgggtggatatcgcttatgcgggcgacaatcttggcaatttatggaag
tttgatctgaccagcgagacggtgacagccaatgctgatggtgttgtaactgcaggctgg
ggtgtggcatttggtggccagccactgtttacggcgctggctccggcagcactcaatggg
gcgcgtactacaacaccatccgacactaaccggcaacctattaccgcaccgcccaccgta
cgcgccaatgaccggcaaacaggtggcgctgttcccggcaccacaaaagccttgggaggc
atgatggtcgcatttggcactggccgcaatatagcgactgacgatccgattgataaaaag
gtgcagaccttatatgcagtgctcgacaatacgcgctatacgatcgatcacaccaatggc
accaaacaatggttgaaggtagctgccgccaccacctgtccaacccctcctggtgaatgc
ctcgaggttcctgcgcccaggactgtcagcatggctaacttggtcaagcgccagattacc
gccgcttcagtaggaacgagtctgggagctggccgtgtggatgaagactctggcaatccc
ctctataacgccagcggcttgtggatcgccggcaagcaaggctggtacatggatttgccc
gaggtgggtgagcgtctgctcaagagcttggagttgtacgatggctctaatgtcttgctg
gcttatacccaagtgcccgccaaggggtctgtggattctgctactgcgactaatgttgag
agttgtaacccgattaccgtcgatgacgaacgccagtatcgaaccatgttaaacatcatg
gatggcaagcgccccacaatgcagctgatcgatgtagctggtaatggctcttacagtaat
gcagacaacgacaatgcatctcggcgccaagtaagtaagggaggacataacgtcatcgcc
tcttcggacacgaggaccaaggatataggaacctgcccgcctggcaccatttgtacggac
gaaatcctgcgtgcgcccgaacaatctttgcgtccaagctggcgtaaggtgaaataa
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