Comamonas odontotermitis: LAD35_18100
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Entry
LAD35_18100 CDS
T07833
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
codo02000
]
LAD35_18100
Transporters [BR:
codo02000
]
Other transporters
Pores ion channels [TC:
1
]
LAD35_18100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF6228
Motif
Other DBs
NCBI-ProteinID:
UBB16681
LinkDB
All DBs
Position
complement(3923627..3925747)
Genome browser
AA seq
706 aa
AA seq
DB search
MSYSSKYFSSFTASLAQPAIVAAVAALCASTAVFAQNAADTQQAPEEVTLGQVTVQADAL
ARSVDDLTTPADVLTGDELVQRRGANLGDTLSGEPGIQATHFGAGASRPVIRGMDGARVK
VLQSGAAIQDASTVSPDHLVTTEPMLARQIEVLRGPSALIYGAGAIGGVVNVLDDKIPTS
VPKKGYEGQVEMRAGTGGAGAAGAVSVTGGSGNFAIHAEGMARNAHDYRVGSGWEGGGKV
AGSRSRGNDGSVGLSWIGDDGSYLGAAYTRQTANYGLPGHNHSIEGCHLHGLHLHCGGHD
HGDGDHEDHDHDHESGDVPVVRLKSERYDLRGEWRNPVAGISAVRLRGGVTDYKHDEVED
GAVATTFRNRAHDLRLEAVHEPIAGWTGVFGLETSRRRFSAVGEEAYLQPTVTRQNGLFL
MEQQRFGDVSVEAAVRHDWQSVDADEAGGGERRSHHGTSASIGAGWRFAPGWRLTSHLTT
ATRMPTAEELYANGLHMATATYELGNSRLRAERSNNIDLGLERKFDSQGNTIASVNLYRN
HIANYIYGKTLDAVDGLQLLQYSQQTATFTGLEAKVQHKINANWRATVWGDMVHARLDDG
SHIPRLSPARVGLRLAGQWEHWRSEAEWTLVKRQNKVAEYETETPGYGMLGWRLSYHDRA
SDGSPWQAYLKVDNLTDKLAYAHTSYIKNAAPLRGRSVTVGFVKQF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattcttccaaatacttttcttccttcacggcgagtctggcgcaaccggccatc
gttgctgcagtggctgcgctgtgcgccagtacggccgtgtttgcacaaaacgctgcggac
acgcagcaagcccccgaagaggtcacgctgggccaggtgacggtgcaggccgatgcactg
gcgcgcagcgtggatgacctgaccacgcctgccgatgtgctgaccggcgacgagctggta
caacgccggggcgccaacctgggcgataccttgtcaggggagccgggcattcaggcaacc
cactttggcgcaggggcgagccgtccggtgatccgtggcatggacggtgcgcgcgtcaag
gtgctgcaaagcggcgcggcgatccaggatgcctctaccgtcagtccagaccatctggtg
accaccgaacccatgctggcgcggcagatcgaggtattgcgcggcccatcggcgctgatc
tatggcgcgggagccattggcggcgtcgtcaatgtgctggacgacaagattcccaccagc
gtgccgaaaaaaggctatgaaggccaggtcgaaatgcgcgcgggcacaggcggtgcgggt
gcagcaggagccgtgtcggtgaccggcggcagcggcaatttcgccatccatgccgagggc
atggcccgcaatgcgcacgattaccgcgtcggcagcggctgggaaggcggaggcaaggtg
gcaggcagccgctcgcgaggcaatgatggcagcgttggcctctcctggattggagacgac
ggcagctatctgggcgcggcctacacgcggcagacggcaaactatggcctgcctggccac
aaccatagtattgaaggctgccacctgcatggcctgcacctgcactgcggcgggcatgac
catggcgacggcgaccatgaagatcatgaccacgaccatgaaagcggcgatgtacccgtg
gtgcgcctgaagagtgagcgctacgatctgcgcggcgagtggcgcaaccctgttgcaggg
atcagtgccgtgcgcctgcgcggcggtgtcacggactataagcacgacgaggtcgaggat
ggagcagtggccaccaccttccgcaaccgtgcgcacgatctgcgcctggaagccgtgcac
gagcccattgccggatggacgggcgtgtttggcctggaaacctcacgccggcgctttagc
gccgtaggagaggaagcctatctccagcctaccgttacccgccagaatggcctgttcctg
atggagcagcagcggtttggcgatgtcagcgttgaagccgcagtgcgccatgactggcag
agtgtcgatgccgacgaggctggcggtggcgagcgccgcagccaccacggcacttctgcg
tcgataggagcaggctggcgcttcgcccccggctggcgcctgacgagtcatctcaccacc
gcgacccgcatgccgaccgccgaagagctgtatgccaatggcctgcacatggcaacggcc
acctacgagctgggcaattcgaggctgcgcgccgagcgctccaacaacatcgatctgggg
ctggagcgcaaattcgattcccagggcaataccattgccagtgtcaacctctaccgcaac
cacattgccaactacatctacggcaagacgctggacgcggtagacggtctgcaactgctg
caatacagccagcagacggccacctttaccgggctggaagccaaggtgcagcacaagatc
aatgccaactggcgagccacggtctggggtgatatggtgcacgcgaggctggatgacggc
agccacatcccgcgcctgtctcccgcacgcgtcggcttgcggctggcgggccagtgggag
cattggcgcagcgaagcggaatggacgctcgtcaaacgccagaacaaggtggcggaatac
gaaaccgaaacgcccggttacgggatgctgggctggcgcctgagctaccacgaccgcgcc
agcgacggctcgccatggcaggcttacctgaaggtggacaacctgaccgacaagctcgcg
tatgcgcacacctcgtacatcaagaacgcagcgccgctgcggggccgctcggtgaccgtg
gggttcgtcaaacagttctga
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