Comamonas odontotermitis: LAD35_18295
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Entry
LAD35_18295 CDS
T07833
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
codo03009
]
LAD35_18295
Enzymes [BR:
codo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
LAD35_18295
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
LAD35_18295
Ribosome biogenesis [BR:
codo03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LAD35_18295
23S rRNA modification factors
LAD35_18295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_25
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UBB16717
LinkDB
All DBs
Position
complement(3977512..3978720)
Genome browser
AA seq
402 aa
AA seq
DB search
MRADVFLVDAGLASTRSQAQRLIASGVQWRTTVLAPWIKVAKNGDEIPAGAEVQLLDASE
AKYISRGGLKLEGALAATGIAVKDLRCLDVGQSTGGFTDCLLQAGAAQVIGIDVGQGQLH
ERLRSDARVVCVEGFNARSLTPESLQAACDEALCEIVEEEEDNDTQPVAPYAWMRNGGQV
SDDYDDSDDAKEQEIENFKAERSAKARARLEGTAPVERRRRPGTENVDITPAFDVVTGDV
SFISLTLVLPAVARVLKPHGQLLMLVKPQFELQPGQIGKGGIVRDKALYAEVEQRIRDCL
TDQGLTVRQWLDSPIEGGDGNHEFFVHAQQGAQIKAPVDADTSTDAAETGESKPAVKKAA
KRPSRADMRAKREKQELYEDPEVASFGQPGPARSKQKKRNER
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctgatgtgtttttggtggatgcgggcctcgcatcaacgcgctcgcaggcgcag
cgattgattgcgtctggcgtgcagtggcgcaccacggtgctggcgccatggatcaaggtt
gccaagaatggcgacgagattcctgcgggcgctgaagtgcaattgctggatgcatcggaa
gccaagtacatctcgcgcggtggtctcaagcttgaaggcgcgctggcagccaccggcatt
gcggtcaaagacctgcgctgtcttgatgtgggccagagcaccggtggctttaccgactgc
ctgctgcaggcaggcgctgcccaggtcatcggcattgatgtagggcaaggtcagttgcat
gagcggctgcgtagcgacgcacgcgtggtctgcgtcgaaggtttcaatgcccgttcgctg
actccggaatcactgcaggcggcgtgcgatgaagccctttgcgaaatcgtcgaagaggaa
gaggacaacgacacccagcctgtagcgccctatgcatggatgcgcaatggcggccaggtg
agcgacgactacgacgacagtgacgacgccaaggagcaggagatagaaaacttcaaggcc
gagcgcagcgccaaggcgcgagcccggcttgagggaacggcgcctgtggagcgccgccgc
aggccgggtaccgaaaatgtggacatcacgcccgctttcgacgtggtgactggcgatgtg
tcgttcatttcgctcacgctggtgctgcccgctgtggcccgtgtgctcaaaccccacggc
cagttgttgatgttggtcaagcctcagttcgagttgcagcccggccagatcggcaagggc
ggcattgtgcgcgacaaggccttgtatgccgaggtcgagcagcgcatccgcgactgcctt
acggaccagggcctcacggtcaggcagtggctggattcgcccattgaaggcggtgatggc
aaccacgaattttttgtgcatgcccagcaaggcgcacagatcaaggcgccagtagatgct
gataccagtaccgatgcggcggagacgggtgagtccaagccggcggtcaagaaggcagca
aaacgcccgtcacgtgctgacatgcgcgccaagcgtgagaaacaggaactgtatgaggac
cccgaagtggccagttttggtcagcccggccccgcgcgttccaagcagaagaagcgcaac
gagcgctga
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