Comamonas odontotermitis: LAD35_18475
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Entry
LAD35_18475 CDS
T07833
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_18475 (sbcD)
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAD35_18475 (sbcD)
Archaeal homologous recombinant proteins
LAD35_18475 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
UBB16751
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All DBs
Position
4021550..4022791
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AA seq
413 aa
AA seq
DB search
MRILHTSDWHLGQHFMGQSRQAEHRALIDWLVAQVDTHGVDAVLIAGDIFDTGAPPSYAR
ELYNQLIARLHQAGVALLVLGGNHDSVSVLDESRDLLRHLGTQVIAATGAPHQHAITLPL
RVSGDPGCIVCALPFIRARDVQQSLAGQSALDKQLALQAAIQSTYQQVYDAALTQQAALL
QSLGRKLPIIATGHLTTVGASSSESVREIYVGSLEAFPTNAFPPADYIALGHIHQPQKVG
GLDHIRYSGSPIALGFDEARQTKQVLLVDVGEDGLQAVTPLPIPVFQPMYALRCSLAALP
DALKKIAISADTERATWLDITIEEDDYLADLPARVQALTDGLPVQVLRIKRQRGTAAAQL
QSATMELLGDLTPLEVFARRLALEALEAPLQQALTERYQEVVHTVTAPGGDAA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctccacacctccgactggcatctgggccagcatttcatgggccagagccgc
caggccgaacaccgggcgctgattgactggctggtggcgcaggtcgatacccatggggtg
gatgccgtgctgattgccggcgatatcttcgacaccggcgcaccgcccagctatgcccgc
gagctgtacaaccagttgattgcccggctgcaccaggccggcgttgcgctgctggtgctt
ggcggcaaccatgactcggtcagcgtgctcgatgaaagccgcgacctgctgcgccacctg
ggcactcaggtgattgccgccacaggcgcgccgcaccagcatgccatcacactgcccctg
cgggtatctggcgatcccggctgcatcgtctgcgccctgcccttcatccgcgcccgcgat
gtgcagcaaagcctggccgggcaaagcgcactcgacaaacaactggccctgcaggccgcc
atccagtccacctaccagcaggtctacgacgccgcgctcacccagcaggctgcgctgctg
caatccctgggccgcaagctgcccatcatcgccaccgggcacctcactaccgtgggcgcc
agcagcagcgaatcggtacgcgaaatctatgtgggttcgctggaggcgtttccgaccaat
gcgtttccgcctgccgactacattgcgcttggccatatccaccagccgcagaaggtaggc
gggctggaccacatccgctacagcggatcgccgattgcactgggctttgacgaggcgcgg
cagaccaagcaggtgctgctggtcgatgtgggagaggatggcctgcaggccgtcacgccg
ctgccgattccggtgttccagcccatgtacgcccttcgctgcagcctggcagcattgcca
gatgctctaaaaaaaatagcaatcagcgcagacacagaacgtgccacctggctggatatc
accattgaagaagacgactacctcgccgacctgcccgcccgcgtgcaagccctgaccgac
gggctgcccgtgcaggtgctgcgcatcaaacgccagcgcggcacggccgcggcgcagttg
caaagcgccaccatggaattgctgggcgacctcactccgctggaagtctttgcacgccgc
ctggcgctggaggcgctggaggcgccactgcagcaggccctgaccgagcgctaccaggag
gtcgtgcacacagtgactgccccaggcggagacgcggcatga
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