Comamonas odontotermitis: LAD35_18480
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Entry
LAD35_18480 CDS
T07833
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
codo03400
]
LAD35_18480
DNA repair and recombination proteins [BR:
codo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LAD35_18480
Archaeal homologous recombinant proteins
LAD35_18480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
RsgA_GTPase
nSTAND3
cobW
AAA_15
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UBB16752
LinkDB
All DBs
Position
4022788..4026222
Genome browser
AA seq
1144 aa
AA seq
DB search
MKILRLRLKNLNSLKGDWDIDFTAAPFADNSLFAITGPTGAGKSTLLDAICLALYHQTPR
LSAISASSNDVMTRHTASCEAEVEFEVKGVRYRAFWSQRRARDKASGALQAPRVELARVA
DGHILSTQSADKLRQIAQITGLDFARFTKSMLLAQGGFAKFLEASANDRAELLEELTGTD
IYSQISQAVFERAREARQALERNKAHAGGMQLLPEDERARLEAHAAQLQTTLGELHTRHT
ALQALQHWQTQTAQAAHAHTQANQALDQARQALQAAAPDLQRLQAHGPALAIAPLHARWL
QAQAASAAGRTQQEQLQEAWGQARSAQWHIHQQASQLAAQSLQKEEQKLQQLQTQQADNS
HWLHSHAAHAQLGEHLSGWREQLERRQFHLQQLQREQDELQQAQQQGGALQQQATDQAGV
LEQAQAARQQADAAARDALQAQQARLTAHGGSLAQLRAAWQTAQQHLQAWQQLQHHASQR
EPLAQQEIQLTAELNKCAAQAQEQQVALAAMRSQYKAQKERVADKQQLLAQEERIQSLEA
HRHALQPGQPCPLCGSQEHPALSAYAALDISATATALQRAQAELETLQHQGEQLGAGHAA
SLSQQTSLHSQLEGLAARIAQWNSQWEQLRQTTVSALPQDAWQQPAVLAQAQQARATQTD
DLQQTLENAEAGERSLQSAKDAAHAAAQALQNAQHQHERLQQARQDNATLQQRLAASVQS
LQASATSADAALQAALAPLGLQVPGDASTNAWLQERQHDWQQWQQHSAQQQSLAQQLALQ
QQRVSQCTQEARQWQQRAAQLQPLNTPSPAASALPATLDDCTVLLERTNQQLASLEGQTQ
QARSHLAQLQQEEAQAHAAWNAALQTSPFSDDRAFARALLPQAEQQRLSALSDALHAAVQ
RAATLTEEAEQHHRQLQAQALTQEAPQAIAEQLLALEAERTRTAEHMGAQRARLADDQAR
RTGQQALLAQIAEQEQDSDLWQRLDSLIGSAKGDKFRKFAQGLTLDHLLLLANRHLTRLH
GRYLLRRKPTGELELDIVDSWQGDVARDTRTLSGGEAFLVSLALALALSDLVSNKTSIDS
LFLDEGFGTLDGETLEVALSALDALNASGKMIGIISHVEALKERIPAQIRVEKGAGVGHS
RLVM
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcaggcttcgcctcaagaacctcaattcgctcaaaggcgattgggacatc
gacttcaccgccgcgccctttgccgacaacagcctgtttgccatcaccggccccacgggg
gcgggcaaatccaccctgcttgacgcgatctgcctggcgctctaccaccagacgccgcgc
ctgtccgccatcagcgccagcagcaacgatgtgatgacccgccataccgcgagctgcgaa
gccgaggtggagttcgaggtcaaaggcgtgcgctaccgcgccttctggagccagcgccgc
gcgcgcgacaaggccagcggcgcgctccaggcacccagggtcgagctggcgcgcgtggca
gatggccacatcctcagcacccagagtgcagacaagctccggcagatcgcgcagatcacc
gggctggactttgcgcgcttcaccaaatcgatgctgctggcccagggcggttttgcaaag
ttcctggaagccagcgccaatgaccgagccgaactgctcgaagagctgaccggcaccgac
atctacagccagatctcgcaagccgtgttcgagcgcgcgcgcgaagcacgccaggcactg
gagcggaacaaggcccatgcaggcggcatgcaactgctgccagaggacgagcgtgcccgg
ttggaagcgcacgcggcccagttgcaaaccaccctgggggagctccacacgcgccacacc
gcactgcaagccctgcaacactggcagacgcagactgcgcaagctgcccacgcacacacg
caggccaaccaggccctggatcaggcccggcaagcgttgcaggctgctgcgcctgacttg
cagcgcctgcaagcccatggcccggcactagccatcgcaccgctgcatgcgcgctggcta
caggctcaggctgccagtgcagcagggcgcacccagcaagaacaactgcaagaggcatgg
ggccaggcccgcagcgcgcaatggcatatccatcagcaagccagccaactggccgcgcaa
tcactgcaaaaagaagagcaaaaactccaacaactgcagacgcagcaagccgacaactcc
cactggctgcatagccacgcagcccatgcacagctgggcgaacacctcagtggctggcgc
gagcaactggaacggcgccagttccatctgcagcagctgcagcgtgaacaagacgagctg
cagcaagcccagcaacagggtggcgccttgcagcagcaagccacggatcaggctggcgtg
ctggagcaggcccaggctgcccggcagcaggcagacgccgcagcgcgcgatgccttgcag
gcgcagcaagcccggctcactgcccatggcggcagcctggcccagttgcgcgcagcctgg
cagacagcccagcaacatctgcaagcctggcaacagctgcagcaccatgccagccagcgc
gagccgctggcccagcaagagatacagctcaccgccgaactgaacaaatgcgcggcccag
gcgcaagagcagcaggttgcccttgccgcaatgcgcagccaatacaaggcccagaaggag
cgggtggccgacaagcaacaattgctggctcaggaagagcgcatccaaagcctagaagcg
caccgccatgcattgcagcccggccagccttgcccgctgtgcggatcgcaggagcatccg
gccctatcggcatacgcggcgctggatatctctgccaccgcaacggcgctgcagcgcgcg
caagccgagcttgaaacactgcagcaccagggcgaacaattgggtgcaggccacgcggcg
agcctcagccagcagaccagcctgcacagccagctggaaggccttgcggcacgcattgcc
caatggaacagccaatgggagcaactgcgccagaccacggtgagcgcattgccgcaggac
gcctggcagcagccagcggtgcttgcccaggcccagcaggcacgcgccacgcaaaccgac
gacctgcaacagaccctggagaatgcagaagctggtgaacgcagcctgcaaagtgccaag
gacgccgcccacgcggccgcacaggcgctgcaaaacgcccaacaccagcatgagcgcctg
cagcaagcccggcaggacaacgccacattgcaacagcggctggccgcctcggtgcaaagc
ctgcaggccagcgccacttccgcagatgcggcgctgcaggcggcactggcccccctgggc
ttgcaagtgcccggcgacgcctccaccaatgcctggctacaggagcgccagcatgactgg
cagcaatggcagcagcacagcgcccagcagcagtctctggcacagcagttggccctgcaa
cagcagcgcgtcagccagtgcacccaggaagcgaggcaatggcagcagcgagccgcgcag
ttgcagcctttgaatacacctagcccggcggcatccgccctgcccgccacgctggacgat
tgcaccgttttgctggagcgcaccaaccagcaactggccagcctggaaggccagacccag
caagcgcgcagccacctggcgcaactgcagcaggaggaggcgcaagcccatgcggcgtgg
aatgccgccctgcaaaccagtccgttcagcgatgaccgcgcttttgcacgggccctgttg
ccgcaggccgaacagcaacggctttccgcgctgagcgatgccttgcacgctgccgtgcag
cgcgcggccaccctgaccgaggaagcagagcagcaccaccgccagctgcaggcccaggct
ttgacgcaggaggcgccgcaggccattgccgagcaattgctggcgctggaggccgagcgc
acccgcactgcagagcacatgggcgcccagcgtgcacgcctggctgatgaccaggcccgc
cgcaccggccagcaggccctgctggcacagattgcggagcaggagcaggacagcgacctg
tggcagcggctcgacagcctcatcggctcggccaagggcgacaaattccgcaagtttgcg
caagggctcacgctcgaccacctgctgctgcttgccaaccgccacctcacccgccttcat
ggccgctacctgctgcgccgcaaacccacgggcgagctggagctcgacatcgtggacagc
tggcaaggcgatgtggcacgcgacacacgtacgctctcgggcggcgaggctttcctcgtc
agcctggccctcgcgttggcgctgtccgacctggtcagcaacaagacctcgatcgactcg
ctgttcctggacgaaggttttggcacgctggacggcgagacgttggaggtggcgctctcc
gctctggacgcgctgaacgccagtggcaagatgatcggcatcatcagccatgtggaagcg
ctcaaggaacgcatccccgcgcagatccgcgtggaaaaaggcgcgggggtgggtcactcc
aggttggtgatgtga
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