KEGG   Comamonas odontotermitis: LAD35_18480
Entry
LAD35_18480       CDS       T07833                                 
Name
(GenBank) AAA family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
codo  Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:codo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:codo03400]
    LAD35_18480
DNA repair and recombination proteins [BR:codo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     LAD35_18480
    Archaeal homologous recombinant proteins
     LAD35_18480
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B SMC_N AAA_29 ABC_tran AAA_21 RsgA_GTPase nSTAND3 cobW AAA_15 NTPase_1 AAA_22
Other DBs
NCBI-ProteinID: UBB16752
LinkDB
Position
4022788..4026222
AA seq 1144 aa
MKILRLRLKNLNSLKGDWDIDFTAAPFADNSLFAITGPTGAGKSTLLDAICLALYHQTPR
LSAISASSNDVMTRHTASCEAEVEFEVKGVRYRAFWSQRRARDKASGALQAPRVELARVA
DGHILSTQSADKLRQIAQITGLDFARFTKSMLLAQGGFAKFLEASANDRAELLEELTGTD
IYSQISQAVFERAREARQALERNKAHAGGMQLLPEDERARLEAHAAQLQTTLGELHTRHT
ALQALQHWQTQTAQAAHAHTQANQALDQARQALQAAAPDLQRLQAHGPALAIAPLHARWL
QAQAASAAGRTQQEQLQEAWGQARSAQWHIHQQASQLAAQSLQKEEQKLQQLQTQQADNS
HWLHSHAAHAQLGEHLSGWREQLERRQFHLQQLQREQDELQQAQQQGGALQQQATDQAGV
LEQAQAARQQADAAARDALQAQQARLTAHGGSLAQLRAAWQTAQQHLQAWQQLQHHASQR
EPLAQQEIQLTAELNKCAAQAQEQQVALAAMRSQYKAQKERVADKQQLLAQEERIQSLEA
HRHALQPGQPCPLCGSQEHPALSAYAALDISATATALQRAQAELETLQHQGEQLGAGHAA
SLSQQTSLHSQLEGLAARIAQWNSQWEQLRQTTVSALPQDAWQQPAVLAQAQQARATQTD
DLQQTLENAEAGERSLQSAKDAAHAAAQALQNAQHQHERLQQARQDNATLQQRLAASVQS
LQASATSADAALQAALAPLGLQVPGDASTNAWLQERQHDWQQWQQHSAQQQSLAQQLALQ
QQRVSQCTQEARQWQQRAAQLQPLNTPSPAASALPATLDDCTVLLERTNQQLASLEGQTQ
QARSHLAQLQQEEAQAHAAWNAALQTSPFSDDRAFARALLPQAEQQRLSALSDALHAAVQ
RAATLTEEAEQHHRQLQAQALTQEAPQAIAEQLLALEAERTRTAEHMGAQRARLADDQAR
RTGQQALLAQIAEQEQDSDLWQRLDSLIGSAKGDKFRKFAQGLTLDHLLLLANRHLTRLH
GRYLLRRKPTGELELDIVDSWQGDVARDTRTLSGGEAFLVSLALALALSDLVSNKTSIDS
LFLDEGFGTLDGETLEVALSALDALNASGKMIGIISHVEALKERIPAQIRVEKGAGVGHS
RLVM
NT seq 3435 nt   +upstreamnt  +downstreamnt
atgaaaatcctcaggcttcgcctcaagaacctcaattcgctcaaaggcgattgggacatc
gacttcaccgccgcgccctttgccgacaacagcctgtttgccatcaccggccccacgggg
gcgggcaaatccaccctgcttgacgcgatctgcctggcgctctaccaccagacgccgcgc
ctgtccgccatcagcgccagcagcaacgatgtgatgacccgccataccgcgagctgcgaa
gccgaggtggagttcgaggtcaaaggcgtgcgctaccgcgccttctggagccagcgccgc
gcgcgcgacaaggccagcggcgcgctccaggcacccagggtcgagctggcgcgcgtggca
gatggccacatcctcagcacccagagtgcagacaagctccggcagatcgcgcagatcacc
gggctggactttgcgcgcttcaccaaatcgatgctgctggcccagggcggttttgcaaag
ttcctggaagccagcgccaatgaccgagccgaactgctcgaagagctgaccggcaccgac
atctacagccagatctcgcaagccgtgttcgagcgcgcgcgcgaagcacgccaggcactg
gagcggaacaaggcccatgcaggcggcatgcaactgctgccagaggacgagcgtgcccgg
ttggaagcgcacgcggcccagttgcaaaccaccctgggggagctccacacgcgccacacc
gcactgcaagccctgcaacactggcagacgcagactgcgcaagctgcccacgcacacacg
caggccaaccaggccctggatcaggcccggcaagcgttgcaggctgctgcgcctgacttg
cagcgcctgcaagcccatggcccggcactagccatcgcaccgctgcatgcgcgctggcta
caggctcaggctgccagtgcagcagggcgcacccagcaagaacaactgcaagaggcatgg
ggccaggcccgcagcgcgcaatggcatatccatcagcaagccagccaactggccgcgcaa
tcactgcaaaaagaagagcaaaaactccaacaactgcagacgcagcaagccgacaactcc
cactggctgcatagccacgcagcccatgcacagctgggcgaacacctcagtggctggcgc
gagcaactggaacggcgccagttccatctgcagcagctgcagcgtgaacaagacgagctg
cagcaagcccagcaacagggtggcgccttgcagcagcaagccacggatcaggctggcgtg
ctggagcaggcccaggctgcccggcagcaggcagacgccgcagcgcgcgatgccttgcag
gcgcagcaagcccggctcactgcccatggcggcagcctggcccagttgcgcgcagcctgg
cagacagcccagcaacatctgcaagcctggcaacagctgcagcaccatgccagccagcgc
gagccgctggcccagcaagagatacagctcaccgccgaactgaacaaatgcgcggcccag
gcgcaagagcagcaggttgcccttgccgcaatgcgcagccaatacaaggcccagaaggag
cgggtggccgacaagcaacaattgctggctcaggaagagcgcatccaaagcctagaagcg
caccgccatgcattgcagcccggccagccttgcccgctgtgcggatcgcaggagcatccg
gccctatcggcatacgcggcgctggatatctctgccaccgcaacggcgctgcagcgcgcg
caagccgagcttgaaacactgcagcaccagggcgaacaattgggtgcaggccacgcggcg
agcctcagccagcagaccagcctgcacagccagctggaaggccttgcggcacgcattgcc
caatggaacagccaatgggagcaactgcgccagaccacggtgagcgcattgccgcaggac
gcctggcagcagccagcggtgcttgcccaggcccagcaggcacgcgccacgcaaaccgac
gacctgcaacagaccctggagaatgcagaagctggtgaacgcagcctgcaaagtgccaag
gacgccgcccacgcggccgcacaggcgctgcaaaacgcccaacaccagcatgagcgcctg
cagcaagcccggcaggacaacgccacattgcaacagcggctggccgcctcggtgcaaagc
ctgcaggccagcgccacttccgcagatgcggcgctgcaggcggcactggcccccctgggc
ttgcaagtgcccggcgacgcctccaccaatgcctggctacaggagcgccagcatgactgg
cagcaatggcagcagcacagcgcccagcagcagtctctggcacagcagttggccctgcaa
cagcagcgcgtcagccagtgcacccaggaagcgaggcaatggcagcagcgagccgcgcag
ttgcagcctttgaatacacctagcccggcggcatccgccctgcccgccacgctggacgat
tgcaccgttttgctggagcgcaccaaccagcaactggccagcctggaaggccagacccag
caagcgcgcagccacctggcgcaactgcagcaggaggaggcgcaagcccatgcggcgtgg
aatgccgccctgcaaaccagtccgttcagcgatgaccgcgcttttgcacgggccctgttg
ccgcaggccgaacagcaacggctttccgcgctgagcgatgccttgcacgctgccgtgcag
cgcgcggccaccctgaccgaggaagcagagcagcaccaccgccagctgcaggcccaggct
ttgacgcaggaggcgccgcaggccattgccgagcaattgctggcgctggaggccgagcgc
acccgcactgcagagcacatgggcgcccagcgtgcacgcctggctgatgaccaggcccgc
cgcaccggccagcaggccctgctggcacagattgcggagcaggagcaggacagcgacctg
tggcagcggctcgacagcctcatcggctcggccaagggcgacaaattccgcaagtttgcg
caagggctcacgctcgaccacctgctgctgcttgccaaccgccacctcacccgccttcat
ggccgctacctgctgcgccgcaaacccacgggcgagctggagctcgacatcgtggacagc
tggcaaggcgatgtggcacgcgacacacgtacgctctcgggcggcgaggctttcctcgtc
agcctggccctcgcgttggcgctgtccgacctggtcagcaacaagacctcgatcgactcg
ctgttcctggacgaaggttttggcacgctggacggcgagacgttggaggtggcgctctcc
gctctggacgcgctgaacgccagtggcaagatgatcggcatcatcagccatgtggaagcg
ctcaaggaacgcatccccgcgcagatccgcgtggaaaaaggcgcgggggtgggtcactcc
aggttggtgatgtga

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