Comamonas odontotermitis: LAD35_18605
Help
Entry
LAD35_18605 CDS
T07833
Name
(GenBank) SufS family cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00450
Selenocompound metabolism
codo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LAD35_18605
Enzymes [BR:
codo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
LAD35_18605
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
LAD35_18605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
UBB19140
LinkDB
All DBs
Position
complement(4054626..4056512)
Genome browser
AA seq
628 aa
AA seq
DB search
MASALFSERPGAGAVPPGIQAPVNIAPPGSPLASPAGLGPGVPGTPIPQGVAPGANLLPA
SPTPVLSLAHRAPALLPHAQAGNGVPDNVLSNLPAYEPRLGSSVQGVPQAVPVDVKTDSH
AHAESASSYYFLQPSPAVPVQEDGLLALAQQARAGAPASGLDGIDLRGPRGASAAAAAPA
SSAAPQYYFAHAVQLPSGFVTPAKPHPHGEQGRTPQSQADRHPPFDINAVRRDFPILAER
VNGKQLVWLDNAATTHKPRQVIERIRHFYEHENSNIHRAAHTLAARATDAYEHAREVVRR
FIHAPDAREVIFVRGTTEAINLVAKAWGGQNVGEGDEIIVSHLEHHANIVPWQQLAQAKG
ARLRVIPVDEQGQIRLDEYQKLLNDRTRIVAIGHVSNVLGTVVPVREVVQIARQRGIATL
VDGAQSIAHTPVDVQDIGADFFVFSGHKIFAPTGIGVLWGRREVLEAMPPWQGGGNMIAD
VTFEKTVFQPLPNTFEAGTGNIADAVGLGAALEYVERIGIHAISQYEHALVDYGMQQLAA
IPGLRLIGTVPGKASVLSFTLAGYTTEEVGKALNDEGIAVRTGHHCAQPILRRFGVETAV
RPSVAFYNTFDEIDQLVAVVRRLAGQRR
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgccttgttcagcgagcgtccgggtgctggcgctgtgccaccaggcatacag
gcgcccgtaaacattgcgccgccgggttcgcccttggcgagccctgcaggtctgggtccg
ggcgtgccgggcacaccgataccgcagggcgtggcaccgggtgccaacctgctgccggct
tcgccaacgcccgtgctgtcgctcgcccaccgggcgcctgctttgctgccgcatgcgcag
gccggcaacggcgtgcccgacaacgtgctgagcaatctgcccgcttacgagccgcgcctg
ggcagcagtgtgcaaggcgtgccgcaggcggtgccggtcgatgtcaaaaccgattctcat
gcgcatgcagaaagcgcgagcagctattattttttacagccatcgccagcggtaccagtg
caagaggatggcctgctggcattggcccagcaggcccgtgctggcgcacctgcctccggt
ttagatggcattgatctgcgcgggccgcgcggcgcaagtgcggcggcagcagcaccggct
tcttccgccgcaccgcagtactactttgcccacgcagttcagctgccgagcggctttgtc
acaccggccaagccccatccacacggcgagcagggcagaaccccgcagtcgcaggcagac
cgccacccgccttttgatatcaacgcggtacggcgggacttcccgattctggccgagcgc
gtgaatggaaagcagctggtctggctggacaatgccgctaccacgcacaagccgcgccag
gtgatcgagcgcatccggcatttctacgaacacgaaaactccaacatccaccgcgcggcc
cacacgctggccgcccgcgccacggatgcctacgagcatgcgcgcgaagtggtgcgccgc
ttcatccatgcgcctgacgcgcgcgaggtgatctttgtgcgcggcaccaccgaggcgatc
aacctggtggccaaggcctggggcgggcagaatgtgggcgaaggcgacgaaatcatcgtc
agccacctggagcaccatgccaacatcgtgccctggcagcaactggcgcaggccaagggt
gcgcggctgcgcgtgattccggtagacgagcagggccagatccgcctggacgaataccag
aagctgctgaacgaccgcaccaggatcgtcgccattggccatgtctccaacgtgctgggc
acggtggtgccggtcagggaggtggtgcagatcgcccgccagcgcggcattgccaccttg
gtggacggcgcgcagtcgattgcgcatacgccggtcgatgtacaggacattggcgcggac
ttcttcgtcttctccggccacaagatcttcgcgcccaccggcatcggcgtgctgtggggg
cggcgcgaagtgcttgaagccatgccgccctggcagggcggcggcaacatgattgcggat
gtgaccttcgagaagaccgtgttccagccgctgcccaataccttcgaggcgggcaccggc
aacattgccgatgccgtgggcctgggcgcggcactggagtacgtggagcgcatcggcatc
catgccatcagccagtacgagcatgcgctggttgattacggcatgcagcagctggctgcc
atccccggcctgcgtctcatcggcaccgtgccgggcaaggcgagcgtgctgtctttcacc
ctggccggttacacgacggaagaagtcggcaaggcgctgaacgacgagggcattgccgtg
cgcaccggccaccattgcgcccagcccattctgcggcgctttggcgtggagactgcggta
cggccttcggttgctttctacaacacctttgacgagatcgatcaattggtggctgtggtg
cggcggctggcaggccagaggcgttga
DBGET
integrated database retrieval system
