Comamonas odontotermitis: LAD35_21690
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Entry
LAD35_21690 CDS
T07833
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
codo
Comamonas odontotermitis
Pathway
codo00521
Streptomycin biosynthesis
codo00523
Polyketide sugar unit biosynthesis
codo00541
Biosynthesis of various nucleotide sugars
codo01100
Metabolic pathways
codo01110
Biosynthesis of secondary metabolites
codo01250
Biosynthesis of nucleotide sugars
Module
codo_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LAD35_21690 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LAD35_21690 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LAD35_21690 (rfbC)
Enzymes [BR:
codo01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LAD35_21690 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UBB19275
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All DBs
Position
unnamed1:300881..301429
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AA seq
182 aa
AA seq
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MQVIDTKIADVKIIEPKIFGDARGFFYESFNQQAFDAAVGRHYNFVQDNHSKSSRGVLRG
LHYQLQQAQGKLVRVTQGSVLDVVVDIRKSSPTFGQWVSVELTEDNKRQLWVPPGLAHGF
VVYSETAEFLYKTTDYYAPAHEHCIAWNDPDLAIDWNLGDIVPQLSAKDQQGVAFARAEV
FV
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgattgatacaaagattgccgacgtcaagatcatcgagcccaagatttttggt
gatgcacgcggtttcttctatgagagcttcaaccagcaggctttcgatgcggcggtgggt
aggcactacaattttgtgcaggacaaccacagcaaaagcagccgtggcgtgttgcgcggc
ctgcactaccagttgcagcaggctcagggcaagctggtacgggtgacgcaaggctccgtt
ctggatgtggtggtggatatccgcaaaagctcgccaacctttggccaatgggtgtcggta
gagctgacggaggacaacaaacgtcagctgtgggtgccgccggggctggcccatggtttt
gttgtatacagcgaaacggcagaatttctctataaaacaacggattattacgcgccagcg
cacgagcactgcattgcatggaatgatcccgatctggccatcgactggaatctaggtgat
atcgtgccgcagctgtctgccaaggatcagcagggcgtggcctttgcccgggctgaggtt
tttgtctga
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