Corynebacterium pseudotuberculosis 258: CP258_02885
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Entry
CP258_02885 CDS
T02118
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
coe
Corynebacterium pseudotuberculosis 258
Pathway
coe03420
Nucleotide excision repair
coe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
coe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP258_02885
03430 Mismatch repair
CP258_02885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coe03400
]
CP258_02885
Enzymes [BR:
coe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP258_02885
DNA repair and recombination proteins [BR:
coe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP258_02885
MMR (mismatch excision repair)
Other MMR factors
CP258_02885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
ADDB_N
AAA_11
HHH
DUF6011
Helicase_Sgs1
DZR
Motif
Other DBs
NCBI-ProteinID:
AFK16194
UniProt:
A0AAU8PK00
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All DBs
Position
593738..595789
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AA seq
683 aa
AA seq
DB search
MIDLNELDSDQRAAASAPRGPVAILAGAGTGKTRTITYRIANLIDRGMASPNRVLAVTFT
RRAAGEMRHRLGVMGVGGVQAQTFHSAAMRQLSYFWPQVAGNLPWKLLDNKFPLVGKAAR
SVGIETTTENVRDLLGEIEWAKATLITPDRYVEHVKDRKIPAAADKIAQVYRRYEQAKTT
SEGMLLDFDDLLLHTAGAIENSTAIAEEFREQYRTFVVDEYQDVTPLQQRVLDAWLGERD
DITVVGDANQTIYSFTGATPNYLLGFSRKYPHATVVKLQRDYRSTPQVTDLANTVIGKAR
GRVAGTRLQLEGMRPPGPDPEFCTFDDEPAEARAVASRIKELLNKGVAASEIAVLYRINA
QSAVFEQALADAGIVYQVRGGGEFFQRAEIRQAMSQLVRVAQRTGTESIRGSALETLVRS
SLAPLGLTPEEPEGTQARERWQSLDALAELTVELTQATPDLDIQGLLEQLNQRASAKHPP
TMQGVTLASLHAAKGLEWDAVFLVGLVDGTLPITHALKGGEPHIEEERRLFYVGVTRARE
HLVCSWAKARQEGGRATRKRSRFFDGIVEEPIHAAVPPRTKRSRRCRVCGSPLSTSAENV
MGRCVDCPSGVGEEVFETLKAWRLDMAKEGGVPAYIVFTDATLHAIAEACPTTTDELLKI
SGIGQMKAEKYGSSLLEVLAQFH
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattgatctcaacgagttggatagcgatcaaagggctgccgctagtgccccgcgggga
cctgtagctatcctcgcgggcgcgggtacaggtaagactcgaacgattacctatcggatt
gccaatcttattgaccgcggcatggctagccccaaccgcgtacttgcagtgacgtttacg
cgtcgcgctgcgggggaaatgcggcaccgactgggagttatgggggtcgggggtgttcag
gcacagacctttcactcagctgcgatgcgacaactatcgtatttttggccgcaagtggcg
gggaatcttccctggaaactgttggataacaagtttccgctcgttggcaaagcagcgcgc
tcggtaggcatagaaacgacgacggaaaacgtcagagatcttttaggcgagattgagtgg
gcaaaggctacgttaataacgccggaccgttatgtggagcatgtgaaggatcggaagatt
cctgcggccgcagataaaattgcccaggtatatcgcaggtatgagcaggctaaaacaacg
agtgaaggcatgcttctggattttgatgatcttttattgcacacggcaggggccattgag
aattcgactgctatcgcagaggaatttcgggagcagtatcgcacttttgtagtcgacgag
taccaggacgttacgcccctgcaacagagagtgctggatgcgtggctcggtgagcgtgac
gatatcactgtggtgggagacgccaatcagactatttattcttttacgggagcaacccct
aattatcttttggggttttctcgtaaataccctcatgcgaccgtagtcaaactacagcga
gattataggtcgaccccccaagtgacggaccttgccaatacggtcattgggaaggctcgg
ggtcgggtagctggtacccggcttcaattggaaggaatgcgccctcccggtccggacccg
gaattctgcactttcgacgatgaaccggctgaggctcgcgccgtagctagtaggattaaa
gaactcttaaacaagggggttgcagcgtcggaaatcgcggtgctttatcgcatcaacgcg
caatcggcggtttttgagcaggcccttgcagatgccgggatcgtttaccaggtgcgtggt
ggcggagagtttttccagcgcgcggagattcgccaggcaatgtcgcagcttgttcgcgtg
gcccagcgcacgggaacggaatcgatccgaggctctgccctggagaccttggtacgctcg
tcgctagcacctttggggttaaccccggaagaaccggaaggaacgcaggctcgcgaacgg
tggcagtccctagacgcccttgcagagctcactgtagagctgactcaagctacaccggat
ttggatatccaaggactcctagaacagctcaatcagcgtgcaagcgcaaagcacccaccg
acgatgcaaggcgtgactttagcgtctctgcatgcggctaaaggcttggaatgggatgcg
gtgttccttgtggggcttgtagacggcacgcttccgatcactcatgcgctcaaaggaggg
gagcctcatattgaagaggaacgcaggcttttctatgtcggcgtcacccgcgcacgggaa
caccttgtgtgctcgtgggcaaaagctcggcaggaaggaggccgtgcaacgcgcaagcga
agccgcttttttgacggcatcgtggaagaacctatccatgccgcagtcccgccgcgtacc
aagcgatcacggcgctgtcgtgtctgtggctcgcccttgagcacgtctgcagaaaacgtg
atgggaaggtgcgttgattgcccatcgggcgtgggcgaggaggtatttgagacactgaag
gcgtggcgtctagacatggccaaagaaggtggcgtacctgcttatatagtctttacagac
gcgaccctgcacgctattgctgaggcctgcccgacgaccaccgatgagctactaaaaatt
tcgggcatcgggcagatgaaagcggagaagtatggcagtagcttgctagaagttttggcc
caatttcattga
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