Corynebacterium pseudotuberculosis 258: CP258_10565
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Entry
CP258_10565 CDS
T02118
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
coe
Corynebacterium pseudotuberculosis 258
Pathway
coe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
coe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP258_10565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coe03400
]
CP258_10565
Enzymes [BR:
coe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CP258_10565
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CP258_10565
DNA repair and recombination proteins [BR:
coe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP258_10565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
DUF7550
Motif
Other DBs
NCBI-ProteinID:
AFK17678
UniProt:
A0AAU8QI79
LinkDB
All DBs
Position
2291985..2292806
Genome browser
AA seq
273 aa
AA seq
DB search
MMDSMPEGHVIHRLARELNKHFQGKAPRVTSPQGRFTAEAALIHSTPFYQAHAWGKHLFI
EFDAPTPERIVHIHLGLIGSLHFDPIEETKGQIRLRIEGDKVAANLRGPQWCRLITTEEM
EIAVGKLGADPLRPDSDLSLVCQRVARSQRSIGSLLMDQRLFAGVGNIYRAESLFRLGIS
PFTPGREVENLDQIWEDLVYLMQEGVRVGRIDTVRPEHTPQAMGRAPRKDDHGGEVYVYR
RLGQPCYVCGTPISGQVMEGRNLFWCPTCQPRP
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagcatgccagaaggccatgtcatccaccggctcgcccgcgagctcaacaag
cattttcaaggaaaagcgccacgcgtcacatcccctcagggaagattcaccgcagaagca
gcacttatccactccactccgttttatcaggcccacgcatggggcaagcatcttttcatt
gaattcgatgcccccacgccagaacgcattgtgcatatccacttaggactgatcggaagc
ctgcattttgacccgattgaagagaccaaggggcagatccgactacggatagagggtgac
aaagtagcagcaaatctacggggaccgcagtggtgtcgccttattacgacggaagagatg
gagatagccgtcggcaagcttggtgcagacccgctgcgcccagactcagacctaagcctc
gtttgccagcgtgtcgcgcgttcacagagatcgatcggatcgttgctcatggaccagcgg
ctttttgccggcgtggggaatatctaccgtgcggaatcgctctttcgcctggggataagc
ccctttacgcccggccgcgaagtggaaaaccttgaccagatatgggaagacttggtttac
ctcatgcaggagggggtgcgggtagggcgcatcgataccgtccgtcctgaacacactcct
caagccatgggccgagcaccccgtaaagacgaccatggcggagaggtctatgtgtatcgt
cgattgggccagccctgttatgtgtgcggcacgcctatcagcgggcaagtaatggagggc
cgaaacctcttctggtgtcccacctgccagcctcgaccatag
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