Comamonas flocculans: FOZ74_01005
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Entry
FOZ74_01005 CDS
T06146
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
cof
Comamonas flocculans
Pathway
cof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOZ74_01005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cof03019
]
FOZ74_01005
Messenger RNA biogenesis [BR:
cof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FOZ74_01005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QEA11733
UniProt:
A0A5B8RRT4
LinkDB
All DBs
Position
complement(214311..215006)
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AA seq
231 aa
AA seq
DB search
MLDREGFRPNVGIVLLNQRNQVFWGKRLGTHSWQFPQGGIDRGETPQEAMFRELHEEVGL
LAHQVRVVARTRDWLRYEVPDRYIRRDARGHYKGQKQIWFLLQLVGNDWDLNLRATNHPE
FDAWRWNEYWVPLDVVVEFKRRVYEMALTELSRFLPRGAQRNRYLRAGMRTREGAAGRDY
AGAYRSGSMLVHPGVELPPGASFDPDPHASLAPAEALGSAPVGGHPLPASK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacagagaaggctttcggccaaatgtcggcatcgtgctgctcaaccagagaaac
caggtattttggggcaaacgtcttggaacgcacagttggcaattcccgcaaggtggcatc
gaccggggtgaaaccccgcaggaggccatgttccgggaactgcacgaggaggtcgggctg
ctggcccaccaggtgcgcgtggttgcccgtacgcgggactggttgcgctacgaagtgccg
gaccgctacatccgccgcgatgcgcgcggacattacaaggggcaaaagcagatctggttt
ctgctgcaactggtcggcaacgactgggacctgaacctgcgcgccaccaaccatccggag
ttcgacgcctggcgctggaacgaatactgggtgccgctggacgtggtggtggagttcaag
cgcagggtctatgagatggcgctgaccgaactctcgcgcttcctgccgcgcggagcgcag
cgcaaccgctatctgcgcgccggcatgcgcacacgcgaaggcgcagcggggcgcgactat
gccggcgcctaccgcagcggctccatgctggtgcatccgggggtggaactgccgcccggg
gccagcttcgaccccgacccgcacgcgagcctggcgcccgccgaggcgctcggctctgcc
cccgtcggcggccacccgctgccggcgagcaagtag
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