Comamonas flocculans: FOZ74_03715
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Entry
FOZ74_03715 CDS
T06146
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
cof
Comamonas flocculans
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cof03016
]
FOZ74_03715
Enzymes [BR:
cof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FOZ74_03715
Transfer RNA biogenesis [BR:
cof03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FOZ74_03715
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
QEA12214
UniProt:
A0A5B8RU47
LinkDB
All DBs
Position
733766..735829
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AA seq
687 aa
AA seq
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MHALFEDAGKFHAGRILSETDASAQIELDSGKRVKVKAAAQLLKFEQPAPAALLARAQEV
AAAIELPLAWEFAPEGEFGFDELARDYFSAAAPAPELAGMLLALHEAPHYFRRAGKGRFK
KAPAEILQQALAAIARKEQVQAQIDDWAAQLAGGSCPAPIREQLYKILFKPDRNAPEYKA
VVQASRNAHKAPLALLQEAGAIASAYDFHWQRFLFEWFPGGTGFAPVSAPEPAQDLPLAP
VVAYSIDDSETTEIDDALSVQGLGTGRVTVGIHIAAPGLAIAPGDALDAIARQRLSTVYL
PGHKITMLPPEVVHSYTLDAERANPALSLYVSYDEATLAVLGSETRLERVQVAINFRHDQ
LDHIVTEDWITNPSISMENTPQPLLDKREELTFLYKLARHLKVGREEVRGKPENFSRPDY
TFRLLDVQGQEPDGSETVSIAVRQRGAPLDLIVAEAAIVANSTWGRLLADHGVPGIYRSQ
ASLAPGVKVRMGLRALPHAGIGVPCYVWATSPLRRYVDLVNQWQIIACVRHGTTAALAAP
FKPKDASLFAIVSGFDTTYAAYNAYQSSMERWWTLRYLKQHGITELDGAVIREGGNGDFL
VRADHLPLVLPVLGAQTLSRGARVRVRLGAVDEISLEVLGTLAARLDDPQDASDDALIDD
EDADTPQATLAIAVDVQEDAPGQAGAT
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcattgtttgaagacgccggcaagttccacgccgggcgcatcctctccgagacc
gacgcttccgcccagatcgagctcgacagcggcaagcgcgtcaaggtcaaggccgcggcg
cagctgctgaagttcgagcagcccgccccggccgcgctgctggcccgggcgcaggaggtc
gccgccgccatcgagctgccgctggcctgggagttcgcgcccgagggcgaattcggcttc
gacgagctggcgcgcgactacttcagcgccgccgcgcccgcgcccgaactcgcgggcatg
ctgctggccctgcacgaggcgccgcactactttcgccgcgccggcaaggggcgcttcaaa
aaagcgccggccgaaatcctgcagcaggcgctggccgccatcgcccgcaaggagcaggtg
caggcgcagatcgacgactgggccgcgcaactggcgggcggcagctgccccgcgccgatc
cgcgagcagctctacaagatcctcttcaagcccgacaggaacgcgcccgaatacaaggcc
gtggtgcaagccagccgcaacgcgcacaaggcgccccttgcgctgctgcaggaggcaggc
gcgatcgcctcggcctacgactttcactggcagcgctttctcttcgagtggtttcccggg
ggcacgggctttgcgccggtgagcgcgcccgagccggcgcaggacctgccgctggcaccg
gtggtggcctattcgatcgacgattccgagaccaccgagatcgacgacgcgctgtcggtg
cagggcctgggcacgggccgcgtcaccgtgggcatccacatcgcggcgccgggcctggcg
atcgcgccgggcgacgcgctcgacgccatcgcgcgccagcgcctgtccacggtctacctg
cccgggcacaagatcaccatgctgccgcccgaggtggtgcacagctacaccctggacgcc
gaacgcgccaacccggcgctgtcgctgtacgtcagctacgacgaggcgacgctggcggtg
ctgggcagcgagacgcggctcgaacgcgtgcaggtggcgatcaacttccgccacgaccag
ctcgaccacatcgtcaccgaagactggatcaccaacccttcgatttcgatggaaaacacg
ccccagcccttgctggacaagcgcgaggagctcacttttctatacaagctcgcgcgccat
ctcaaggtcgggcgcgaggaggtgcgcggcaagcccgagaacttcagccggcccgactac
accttccgcctgctggacgtgcagggccaggagcccgacggcagcgagacggtatcgata
gcggtgcgccagcgcggcgcgccgctggacctcatcgtggccgaggccgccatcgtggcc
aacagcacctgggggcgcctgctggccgaccatggcgtgcccggcatctaccgcagccag
gcgagcctggcccccggcgtgaaagtgcgcatgggcctgcgcgcgctgccgcatgcgggc
ataggcgtgccctgctacgtctgggccacctcgccgctgcgccgctacgtggacctggtc
aaccagtggcagatcatcgcctgcgtgcgccacggcaccacggccgcgctggccgcgccc
ttcaagcccaaggacgccagcctgtttgccatcgtcagcggctttgacaccacctacgcc
gcctacaacgcctaccagagcagcatggagcgctggtggacgctgcgctacctcaagcag
cacggcatcaccgagctggacggcgcggtcatccgcgaaggcggcaacggcgacttcctg
gtgcgcgccgaccacctgccgctggtgctgccggtgctgggcgcgcagacgctcagtcgc
ggggcgcgcgtgcgcgtgcgcctgggcgcggtcgacgagatctcgctggaggtgctcggc
acgctggccgcgcgcctggacgacccgcaggacgcgagcgacgacgcgctgatcgacgac
gaggacgccgacacgccccaggccacgctggcgatcgcggtggacgtgcaggaagacgcc
cccggccaggccggcgcgacctga
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