Comamonas flocculans: FOZ74_03890
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Entry
FOZ74_03890 CDS
T06146
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cof
Comamonas flocculans
Pathway
cof03420
Nucleotide excision repair
cof03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FOZ74_03890
03430 Mismatch repair
FOZ74_03890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cof03400
]
FOZ74_03890
Enzymes [BR:
cof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FOZ74_03890
DNA repair and recombination proteins [BR:
cof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FOZ74_03890
MMR (mismatch excision repair)
Other MMR factors
FOZ74_03890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEA12245
UniProt:
A0A5B8RVI6
LinkDB
All DBs
Position
complement(784306..786690)
Genome browser
AA seq
794 aa
AA seq
DB search
MLAQDRAAAGAQMPLLAHLNPEQRAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLQTGQ
AAPGEILAVTFTNKAAKEMLTRLSAMLPISVRGMWIGTFHGLCNRMLRAHHKLVGLPQTF
QILDAQDQLSAVKRLLKAHQVDEEHHPPRQVAWFINGCKEEGLRPDAVPAPNDETRQRVE
LYRLYEAQCQREGVVDFAELLLRSYELLRDHAPVRAHYQRRFAHILVDEFQDTNRLQYLW
LKQLAGDVVDGQFTPRGSVMAVGDDDQSIYAFRGARVGNMQDFVREFAVGQQIKLEENYR
SCSNILDSANALIAHNSRRLGKNLRTARGPGEPVRIHEAESDLMEARWLVDEIRQLAADG
MARQHIAVLYRSNAQSRALESQLFNAGVPYRVYGGLRFFERAEIKHALAYLRLLENPHDD
TSFARVVNFPPRGIGARTLEVLQDAARAAGCSLWDAVSSVGGSAGTKLGGFVALVEVMRE
RSSGQSLRAIIEQVVEGSGLAGHYRQDKEGEDRLDNLKELVSAAESFVMQEGFGRDAVAL
PVDETAALTQSPVSQGVDPDAPMGGPQLDAAAGETLSPLVAFLTHAALEAGDNQAQAGQD
AVQLMTVHASKGLEFDAVFICGLEEGLFPHENAMADQGGLEEERRLMYVAITRARKRLYL
SHAQVRMLHGQTRYNMASRFFDELPEGALKHLTPQRRSAGSFATDYRAYSERQSRVSGGF
DLDYSSLGSAGLPARKEAPAHGITQGAQVFHTKFGEGRVLAIEGQGEDARAQVAFTRHGT
KWLALAIAKLTLVE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcccaagaccgcgccgccgccggcgcccagatgccgctgctggcgcacctgaac
cccgaacaacgtgccgccgtgaccctgcccgcgggccatgccctgatcctggccggggcc
ggctcgggcaagacccgggtgctgaccacgcgcatcgcctggctgctgcagaccggccag
gccgcgcccggcgaaatcctggccgtgaccttcaccaacaaggcggccaaggagatgctc
acgcgcctgtccgccatgctgcccatcagcgtgcgcggcatgtggataggcacgttccac
gggctgtgcaaccgcatgctgcgcgcccaccacaagctggtcgggctgccccagaccttc
cagatcctggacgcgcaggaccagctctcggccgtcaagcgcctgctcaaggcccatcag
gtggacgaagagcaccatccgcccaggcaggtagcctggttcatcaacggctgcaaggaa
gagggcctgcgccccgacgcggtgcccgcgcccaacgacgaaacccgccagcgcgtggag
ctgtaccgcctgtacgaggcgcagtgccagcgcgagggcgtggtcgattttgccgagctg
ctgctgcgctcctacgagctgctcagggaccacgcgccggtgcgcgcgcactaccagcgg
cgctttgcgcacatcctggtggacgaattccaggacaccaaccgcctgcagtacctgtgg
ctcaagcagctggcgggcgacgtggtggacgggcagttcacgccccggggcagcgtgatg
gcggtgggcgacgacgatcagagcatctacgcctttcgcggcgcccgcgtgggcaacatg
caggacttcgtgcgcgagttcgccgtggggcagcagatcaagctggaagagaactaccgc
tcctgctccaacatcctggacagcgccaacgccctgatcgcgcacaacagccggcgcctg
ggcaagaacctgcgcaccgcccgcgggccgggcgagccggtgcgcattcacgaggccgag
agcgacctgatggaggcgcgctggctggtcgacgagatccgccagctggccgccgacggc
atggcgcgccagcacatcgcggtgctctaccgcagcaacgcgcaaagccgcgcgctcgag
tcgcagttgttcaacgccggcgtgccctaccgcgtctatggcggactgcgctttttcgag
cgcgccgagatcaagcacgcgctcgcctacctgcgcctgctggagaacccgcacgacgac
accagctttgcccgcgtggtgaactttccgccgcgcggcatcggcgcgcgcacgctggag
gtgctgcaggacgcggcgcgcgccgccggctgctcgctgtgggacgcggtcagcagcgtg
ggcggcagcgccggcaccaagctcggcggcttcgtcgcgctggtcgaggtgatgcgcgag
aggagcagcggccagagcctgcgcgccatcatcgagcaggtggtcgaaggcagcggcctg
gccgggcactaccgccaggacaaggagggcgaggaccgcctggacaacctcaaggagctg
gtgagcgcggccgagagcttcgtgatgcaggaaggcttcgggcgcgacgcggtggcgctg
ccggtggatgagaccgcggcgctcacgcaaagcccggtcagccagggtgtggaccccgac
gcgcccatgggcgggccgcagctggacgcggccgcgggcgagacgctgtcgccgctggtg
gccttcctcacgcacgcggcgctggaggcgggcgacaaccaggcccaggccgggcaggat
gcggtgcagctcatgacggtgcacgccagcaagggcctggagttcgacgcggtcttcatc
tgcggcctggaagaggggttgtttccgcacgagaacgcgatggccgaccagggcggcctg
gaggaagagcgccgcctgatgtacgtggcgatcacccgcgccagaaagcgcctgtacctg
agccacgcccaggtgcgcatgctgcacgggcagacgcgctacaacatggccagccgcttc
ttcgacgaactgcccgagggcgcgctcaagcacctcacgccgcagcgccggtcagcaggc
tcttttgctactgattacagagcttatagcgaacgccagtcaagggtttcaggcggattt
gacctggattattccagcctgggcagcgccggtctgccggcgcgcaaggaggcgccggcg
cacggcatcacgcagggggcgcaggtgtttcacaccaagttcggcgagggccgggtgctg
gccatcgaggggcagggcgaggacgcgcgcgcccaggtggcgttcacccgccacggcacc
aagtggctggcgctggcgatcgccaagctcacgctggtcgaatga
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