Comamonas flocculans: FOZ74_06310
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Entry
FOZ74_06310 CDS
T06146
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cof
Comamonas flocculans
Pathway
cof03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FOZ74_06310 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cof03021
]
FOZ74_06310 (rpoC)
03400 DNA repair and recombination proteins [BR:
cof03400
]
FOZ74_06310 (rpoC)
Enzymes [BR:
cof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FOZ74_06310 (rpoC)
Transcription machinery [BR:
cof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FOZ74_06310 (rpoC)
DNA repair and recombination proteins [BR:
cof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FOZ74_06310 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
QEA12672
UniProt:
A0A5B8RV95
LinkDB
All DBs
Position
complement(1293506..1297735)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGLASPEKIHSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQAKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKGSIMSEDDYDAKVQEYGDEFIAKM
GAEGIKDLLQGIDLEPEIERLRGDLTGSEAKVKKNTKRLKVLEAFKKSGIKPEWMILEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVGPQLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVESGTPVVWDILEEVIREHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYHATRERVNGKGEGMGFMDVAEVQRALDAGVV
ELTSKIRVRLTEWNKNKDSGEFEASTSVVETTVGRALLSEILPRGLAFSNLNKALKKKEI
SKLINASFRKCGLKETVVFADKLLQNGFRLATHAGISISVDDMLVPPQKADILARAEAEV
KEIEQQYVSGLVTAGERYNKVVDIWGKAGDDVSKVMMDQLKVEKTLDRNGKEVEQESFNS
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTEEDCATHNGALMRAVVDGGEVIESLRERILG
RVAADDVLHPETRAVLATAGTLLSEDVIDELEHAGVDEVKVRTPLTCDTRYGLCAKCYGR
DLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASGVEAKSNGNVGFN
ATMRYVTNSKGELVVISRSGEIVIHDEHGRERERHRVPYGATLHVQADQQIKAGTHLAHW
DPLTRPIITEYAGRVKFENIEEGLTVAKQVDDVTGLSTLVVIDPKRRGSAKVVRPLVKLI
DASGNEVKIPGTDHAVAIGFQIGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRV
AELFEARSPKDKGMLAEMTGTISFGKETKGKVRLQITDPDGHVWDELVPKEKNILVHEGQ
VVNKGEHIVDGPADPQDILRLLGIEELARYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVIDNPGESSYIQGEQVERSEVLNTNEALQKDGKIPATYTNLLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHKARKVKDQMDEAERRA
IEEAEAAELAAAGEDEAATAHDEGGDAAR
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaagcaattcacgcccgatgagcacttcgatgccatc
aagatcggcctggcgtcgcccgagaagattcactcctggtccttcggtgaagtcaagaag
cccgagaccatcaactaccgcaccttcaagcccgagcgcgacggcctgttctgcgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggaaagtacaagcgcctgaagcac
cgcggcgtgatctgcgagaagtgcggcgtggaagtcacccaggccaaggtgcgccgcgag
cgcatgggccacatcgacctggccgcgccctgcgcgcacatctggtttctcaagagcctg
cccagccgtctcggcctggtgctggacatgacgctgcgcgacatcgagcgcgtgctctac
ttcgaagcctacgtggtcaccgacccgggcatgacgccgctcaagaagggcagcatcatg
agcgaggacgactacgacgccaaggtgcaggaatacggcgacgagttcatcgccaagatg
ggcgccgagggcatcaaggacctgctgcagggcatcgacctggagcccgaaatcgagcgc
ctgcgcggcgacctgaccggctcggaagccaaggtcaagaagaacaccaagcgcctgaag
gtgctggaagccttcaagaagtccggcatcaagcccgagtggatgatcctggaagtgctg
ccggtgctgccgcccgacctgcgcccgctggtgccgctcgatggtggccgtttcgccacc
tccgacctgaacgacctgtaccgccgcgtcatcaaccgcaacagccgcctgcgccgcctg
ctggagctcaaggcgccggagatcatcgcgcgcaacgaaaagcgcatgctgcaggaagcc
gtcgattcactgctggacaacggccgccgcggcaaggcgatgaccggcgcgaacaagcgc
gcgctcaagtcgctggcggacatgatcaagggcaagggcgggcgcttccgccagaacctg
ctgggcaagcgcgtggactactcgggtcgctcggtcattaccgtaggcccgcagctcaag
ctgcaccagtgcggcctgcccaagctgatggcgcttgaattgttcaagcccttcatcttc
tcgcgcctggaggccatgggcatcgcgacgacgatcaaggccgccaagaaggaagtggaa
agcggcacgccggtggtgtgggacatcctcgaagaggtgatccgcgagcacccggtgatg
ctcaaccgcgcgcctacgctgcaccgcctgggcatccaggctttcgagcccatcctgatc
gaaggcaaggccatccagctgcacccgctggtctgcgccgccttcaacgccgacttcgac
ggcgaccagatggccgtgcacgtgccgctgtcggtggaagcgcagctggaagcgcgcacg
ctgatgctggcgtccaacaacgtgctcttcccggcttcgggcgagccctccatcgtgccc
tcgcaggacgtggtgctgggcctgtaccacgccacgcgcgagcgcgtgaacggcaagggc
gaaggcatgggcttcatggacgtggccgaggtgcagcgcgcgctggacgccggcgtggtc
gagctcaccagcaagatccgcgtgcgcctgaccgaatggaacaagaacaaggacagcggc
gagttcgaggcatccacctcggtggtggaaaccaccgtgggccgcgcgctgctgtccgag
atcctgccccgcggcctggcgttctccaacctgaacaaggcgctcaagaagaaggaaatc
tccaagctcatcaacgcgtcttttcgcaagtgcggcctgaaggaaaccgtggtgttcgcc
gacaagctgctgcaaaacggcttccgcctggccacgcacgccggcatttccatctcggtg
gacgacatgctggtgccgccgcaaaaggccgacatcctggcccgcgccgaggccgaggtg
aaagagatcgagcagcagtacgtctcgggcctggtcaccgccggcgagcgctacaacaag
gtggtggacatctggggcaaggccggagacgacgtctccaaggtcatgatggaccagctc
aaggtcgaaaagaccctggaccgcaacggcaaggaagtcgagcaggagtccttcaactcc
atctacatgatggccgactcgggcgcgcgtggttcggcggcgcagatccgccagctcgcg
ggcatgcgcggtctgatggccaagcccgacggctccatcatcgagacgccgatcacggcc
aacttccgtgaaggcctgaacgtgctgcagtacttcatctccacgcacggcgcgcgcaag
ggcctggcggacacggcgctcaagaccgccaactccggctacctcacgcgccgcctggtg
gacgtgacgcaggacctggtggtcaccgaggaagactgcgccacgcacaacggcgcgctg
atgcgcgcggtggtcgacggcggcgaggtcatcgaatcgctgcgcgagcgcatcctcggg
cgcgtggcggccgacgacgtgctgcaccccgaaacccgtgcggtgctggccacggccggc
acgctgctgtcggaagacgtcatcgacgagctggaacacgccggcgtggacgaggtcaag
gtgcgcacgccgctgacctgcgacacccgctacggcctgtgcgccaagtgctacggccgg
gacctgggccgcggcggcctgatcaacctgggcgaggccgtgggcgtgattgccgcgcaa
tccatcggcgagccgggcacgcagctgaccatgcgtaccttccacatcgggggtgcggca
tcgcgcgcggccgtggcctcgggcgtggaagccaagagcaacggcaacgtgggcttcaac
gccaccatgcgctacgtcaccaactccaagggcgagctggtggtgatctcgcgctcgggc
gaaatcgtcatccacgacgagcacggccgcgagcgtgagcgccaccgcgtgccctacggc
gcgacgctgcacgtgcaggccgaccagcagatcaaggccggcacgcacctggcgcactgg
gacccgctcacgcgccccatcatcaccgagtacgccggccgggtgaaattcgagaacatc
gaagaaggcctgaccgtggccaagcaggtggacgacgtgaccggcctgtccacgctggtg
gtcatcgaccccaagcgccgtggctcggccaaggtggtgcgcccgctggtcaagctcatc
gacgcctcgggcaacgaggtcaagatccccggcaccgaccacgcggtggccatcggcttc
cagatcggcgcgctgatccaggtgcgcgacggccaggacgtgggccccggcgaggtgctg
gcgcgcattccggtcgaaggccagaagacgcgcgacatcaccgggggcctgccgcgcgtg
gccgagctgttcgaagcccgcagccccaaggacaagggcatgctggccgagatgaccggc
accatctccttcggcaaggaaaccaagggcaaggtgcgtctgcagatcaccgacccggac
ggccacgtctgggacgagctggtgcccaaggaaaagaacatcctggtgcacgaaggccag
gtggtgaacaagggcgagcacatcgtcgacggcccggccgatccgcaggacatcctgcgc
ctgctgggcatcgaggagctggcgcgctacatcgtcgatgaggtgcaggacgtctaccgc
ctgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgtgcgccagatgctgcgc
cgcgtcgtgatcgacaaccccggcgaatcgagctacatccagggcgagcaggtcgagcgc
tccgaggtgctcaacaccaacgaggcattgcaaaaggacggcaagatccccgcgacctac
accaacctgctgctgggcatcaccaaggcttcgctgtccaccgactcgttcatctccgcc
gcgtccttccaggaaaccacgcgcgtgctgaccgaagcggccatcatgggcaagcgcgac
gagctgcgtggtctgaaggagaacgtcatcgtcgggcgcctgatccccgccggcaccggc
ctggcctaccacaaggcgcgcaaggtcaaggaccagatggacgaggccgagcgccgcgcc
atcgaagaggccgaggccgccgagctggccgccgccggcgaagacgaagccgccaccgcc
catgacgagggcggcgacgctgcccgctaa
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