Comamonas flocculans: FOZ74_10570
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Entry
FOZ74_10570 CDS
T06146
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cof
Comamonas flocculans
Pathway
cof02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FOZ74_10570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cof02022
]
FOZ74_10570
02035 Bacterial motility proteins [BR:
cof02035
]
FOZ74_10570
Two-component system [BR:
cof02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
FOZ74_10570
Bacterial motility proteins [BR:
cof02035
]
Pilus system
Twitching motility proteins
FOZ74_10570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_8
AAA
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QEA13436
UniProt:
A0A5B8RV68
LinkDB
All DBs
Position
complement(2196543..2198027)
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AA seq
494 aa
AA seq
DB search
MNATMTGNAPSQVLVIDDEPDLRTLCELTLLREGYRVQTAASLEQARAELARQSFDVVIT
DMRLPDGLGMELLHEMHAQRRGERCIVMTAYGSAENAVEALRAGAFDYLTKPVDLKQVRS
VVASAARQAPGTAMLAAARQKPRTDAEAEVRPAALARLVGVSQAMRRLRTDIAKVARSMA
PVLVRGESGTGKELVARALHACSPRAAGPLVAVNCGAIPEALLEAEFFGARKGSYTGATQ
DRVGYFQAASGGTLFLDEIGELPLSMQPKLLRAVQERTIRPLGATQEETVDVRIVSATHR
DLAADVHSGRFRQDLYYRLNVIELATAPLRERLEDLPVLCATLLERLAQESGVATPTLDE
AMLARLAQYPLSGNVRELENLLHRALALSDGTGLQIPPYLPSGDAPESALRNTAAAAPAQ
HDQDGAAARSGGSLLAWLDAREAALLRHTLDECAGDHGAAAAKLGLSARQWTVRLRRLGL
PHAPEADVHHGAQS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgaccatgaccggcaacgccccctcccaggtgctcgtgatcgacgacgagcct
gacctgcgcacgctgtgcgagctaaccctgctgcgtgaaggctaccgcgtgcagacggcg
gccagcctggaacaggcacgggccgagctggcgcgccagagctttgacgtggtgatcacc
gacatgcgcttgcccgacggcctgggcatggagctgctgcacgagatgcacgcccagcgg
cgcggcgaacgctgcatcgtcatgaccgcctacggctcggcggaaaacgcggtcgaggcg
ttgcgcgccggcgccttcgactatctgaccaagccggtcgacctcaagcaggtgcgtagt
gtcgtcgcctccgccgcgcggcaggcgccgggcacggccatgctcgctgcggcaaggcaa
aagccccggaccgacgcggaggccgaggtgcggcccgcggcgctggcgcggctggtcggg
gtgtcacaggccatgcgccggctgcgcacggacatcgccaaggtggcgcgcagcatggcg
ccggtgctggtgcgcggcgaatcgggcaccggcaaggaactggtggcgcgcgcgctgcac
gcctgcagcccgcgcgcggccggcccgctggtggcggtcaactgcggcgccatccccgaa
gcgctgctcgaggccgaattcttcggcgcgcgcaaaggttcctacaccggcgcaacgcag
gaccgcgtgggctatttccaggcggccagcggcggcacgctgtttctcgacgagatcggc
gagctgccgctgtccatgcaacccaagctgctgcgtgcggtacaggaacgcaccatccgc
ccgctcggcgccacgcaggaggaaaccgtggacgtgcgcatcgtcagcgccacccatcgc
gacctggcggccgacgtacacagcggacgctttcgccaggacctgtactaccggctcaac
gtcatcgagctggccaccgcccccttgcgcgaacgtctggaggacctgccggtgctgtgc
gccacgctgctcgagcgcctggcacaggagtcgggcgtagccacaccgacgctggacgag
gcgatgctcgcgcggctggcgcagtacccgctcagcggcaacgtgcgcgagctcgagaac
ctgctgcaccgcgcgctcgcactgagcgacggcaccggcctgcagatacccccatacctg
ccgtccggcgatgcgcccgagtcggccctccgcaacactgccgcagcggcaccggcgcag
catgatcaggacggcgcagcggcgcgcagcggcggctcgttgctcgcctggctcgatgcg
cgcgaagccgccctgcttcgccacaccctggacgaatgcgccggcgaccacggcgcagca
gcggccaagctgggcctgagcgcgcgccaatggacggtgcggctgcggcgcctgggcctg
ccgcacgcgcccgaggccgacgtgcaccatggcgcgcagtcctga
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