Comamonas flocculans: FOZ74_10865
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Entry
FOZ74_10865 CDS
T06146
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cof
Comamonas flocculans
Pathway
cof03410
Base excision repair
cof03430
Mismatch repair
cof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOZ74_10865 (recJ)
03430 Mismatch repair
FOZ74_10865 (recJ)
03440 Homologous recombination
FOZ74_10865 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cof03400
]
FOZ74_10865 (recJ)
DNA repair and recombination proteins [BR:
cof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FOZ74_10865 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FOZ74_10865 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FOZ74_10865 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QEA13493
UniProt:
A0A5B8RWN2
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All DBs
Position
complement(2262677..2264398)
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AA seq
573 aa
AA seq
DB search
MKIVVRDVPPRSAWALEQAGVHPLLARLYAARGVRSAGELDDALARLLPPATLKGAQPAA
QLLADAIARQARICIVADYDCDGATACAVGLRGLRLLGARHVDYLVPNRVVDGYGLTAPI
AERVAAAGAELLITVDNGIASVQGVRRARELGLQVVVTDHHLPGGELPAAHAIVNPNQPG
CSFASKCLAGVGVMFYVLTALRAELRARGSFDAARQPRLEPLLPLVALGTVADVVPLDAN
NRRLVAQGLKRVRAGQMPPGMAALFAAAGRRAAQASSFDFGFALGPRINAAGRLADMTLG
IECLATDDTGRAQELARQLDAINRERREIEGGMREQALATIDAQLDAAADPPPAMAVFDA
SFHEGVVGIVASRIKDRLHRPTFVFARSGAPGHAHELKGSGRSIPGFHLRDALDLIAKRH
PGVLLRFGGHAMAAGCTVERTQLATFEQAFAQVASEWLDAATLTRRVETDGPLAPEYLRT
DLVDLLALEVWGQGFAAPTFSDQVQVLSQRLVGEAHNHLQLKLRYLGQEVDAIWFSRTEP
VPAQALLAFRLDVNEWRGQRRVQLLVQGMQERA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtggttcgtgacgtaccgccccgcagcgcctgggcgctggagcaggcgggc
gtgcacccgctgctggcgcgcctgtacgccgcgcgcggcgtgcgcagcgcgggcgagctg
gacgacgccctggcccggctgctgccacccgccacgctcaagggtgcgcagccggcggcg
cagctgctggccgacgccatcgcgcgccaggcccgcatctgcatcgtggccgactacgac
tgcgacggtgccaccgcctgcgccgtcggcctgcgcggcctgcgcctgctgggcgcgcgg
cacgtggactacctcgtgcccaaccgcgtggtggacggctacggcctgaccgcacccatc
gccgagcgcgtggccgcggccggggccgagctgctcatcaccgtggacaacggcatcgcc
agcgtgcagggcgtgcggcgcgcgcgcgaactcggcctgcaagtcgtcgtcaccgaccac
cacctgcccggcggcgaattgccggcggcgcacgccatcgtcaaccccaaccagcccggc
tgcagctttgccagcaaatgcctggccggcgtgggcgtgatgttctacgtcttgacggcc
ctgcgcgccgaactgcgcgcgcgcggcagcttcgacgccgcccgccagccgcgcctggag
cccctgctgccgctggtggccctgggcaccgtggccgacgtggtgccgctggacgcgaac
aaccgccgcctggtggcccagggcctcaagcgcgtgcgcgccgggcagatgccgccgggc
atggccgcgctctttgccgccgccgggcgcagggcggcgcaggccagcagctttgacttc
ggctttgcgctgggcccgcgcatcaacgccgccgggcggctggccgacatgaccctgggc
atagagtgcctggccaccgacgacaccggccgcgcgcaggagctcgcgcgccagctcgac
gccatcaaccgcgaacgccgcgagatcgaaggcggcatgcgcgagcaggcgctggccacc
atcgacgcgcaactggatgcagcagccgacccgccgcccgcgatggcggtgttcgacgcg
agctttcacgaaggcgtggtcggcatcgtcgcctcgcgcatcaaggacaggctgcaccgc
cccaccttcgtctttgcccgcagcggcgcgccgggccacgcgcacgagctcaagggctcg
gggcgctccattcccggctttcacctgcgcgacgcgctggacctcatcgccaagcgccac
cccggcgtgctgctgcgctttggcggccacgccatggccgccggctgcaccgtggagcgc
acgcaactggccaccttcgagcaggcctttgcccaggtggccagcgaatggctggacgct
gccacgctcacgcgccgcgtggaaaccgacggtcccctggcccccgaatacctgcgcacc
gacctggtggacctgctcgcgctggaagtctggggccagggctttgccgcgcccaccttc
agcgaccaggtgcaggtgctcagccagcgcctggtgggcgaggcgcacaaccacctgcag
ctcaagctgcgctatctgggccaggaggtggacgcgatctggttctcgcgcaccgaaccc
gtgcccgcacaggcgctgctggccttccggctggacgtgaacgaatggcgcggccagcgg
cgggtgcagttgctggtgcaagggatgcaggagagggcctga
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