Comamonas flocculans: FOZ74_11025
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Entry
FOZ74_11025 CDS
T06146
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cof
Comamonas flocculans
Pathway
cof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOZ74_11025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cof03400
]
FOZ74_11025
Enzymes [BR:
cof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FOZ74_11025
DNA repair and recombination proteins [BR:
cof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FOZ74_11025
Prokaryotic type
FOZ74_11025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QEA13525
UniProt:
A0A5B8RZA0
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All DBs
Position
2296366..2297076
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AA seq
236 aa
AA seq
DB search
MSMQEPSQLQVADPAAWPVAPGWAPLVAQFFASPRGLALLDFLRQRLAAGASVFPPRPLR
ALELTAPEAVRVVILGQDPYHGRGQAEGLAFSVAPGVPLPPSLRNIFKELQRDLGTPWPA
FPDPGGSLVRWARHGVLLLNTCLTVEEGQPASHAGKGWEQLSDAVIRQVAGGERPLVFML
WGSHAQAKRALIPQDRGHLVLCANHPSPLSALRPPRPFIGCGHFSQARAFRLEHGG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcaggaaccaagccaattgcaggtggcggaccccgcagcctggcccgtcgcg
cccggttgggcgcccctggtggcgcagttctttgccagcccgcgcgggctggccctgctg
gacttcctgcgccagcgcctggccgccggcgccagcgtctttccgccccggccgctgcgt
gcgctggagctgaccgcgcccgaagcggtgcgcgtggtcatcctcggacaagacccctac
cacggccgcgggcaggcggagggcttggccttttcggttgcgcccggtgtgccgctcccg
ccttcattgcgcaacatcttcaaggaattgcaacgcgatctgggcacgccctggccggct
ttcccggaccccggcggctcgctggtgcgctgggcgcgccatggggtgctgctgctcaac
acctgtctgacggtggaagagggccagcccgcgagccacgccggcaagggttgggagcag
ctgagcgacgcggtcatccgccaggtggccgggggtgagcggccgctggttttcatgctc
tggggcagccatgcgcaggccaagcgggcgctgattccccaggatcgtggccatctcgtg
ctctgcgccaaccacccttcgccgctgtcggcgctgcgcccgcccaggcccttcatcggc
tgtggtcatttcagccaggcccgcgccttccggttggagcatggcggttga
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