Comamonas flocculans: FOZ74_11255
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Entry
FOZ74_11255 CDS
T06146
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cof
Comamonas flocculans
Pathway
cof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOZ74_11255 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cof03021
]
FOZ74_11255 (rho)
03019 Messenger RNA biogenesis [BR:
cof03019
]
FOZ74_11255 (rho)
Transcription machinery [BR:
cof03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FOZ74_11255 (rho)
Messenger RNA biogenesis [BR:
cof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FOZ74_11255 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_25
S1CSD-TOTE-2
ResIII
Motif
Other DBs
NCBI-ProteinID:
QEA13562
UniProt:
A0A5B8RY94
LinkDB
All DBs
Position
complement(2343820..2345082)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLNELKALHVSEVLKQAEELGVENGGRMRKQELMFAIIKKRAKAGEQVFADGVLEILPD
GFGFLRSPDTSYTASTDDIYISPSQVRRFNLHTGDMIEGEVRIPKDGERYFALTKLDKVN
GNPPEQNKHKVMFENLTPLFPKEQMKLERDIKGEENITGRIIDIIAPIGRGQRALIVAPP
KSGKTVMMQHIAHAITSNYPDVILMVLLVDERPEEVTEMQRSVRGEIIASTFDEPATRHV
HVAEMVIERAKRLVELGQDVVILLDSITRLARAYNNVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELHLNRRLYEKRVFPAIEL
NKSGTRREELLLAPEVLQKTRILRQFMYNMDEIESMELMIKKMRETKSNVDFFEAMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttaacgaattgaaggccctgcacgtctccgaagtgctcaagcaggccgaagag
cttggcgtcgaaaacggcggccgcatgcgcaagcaggagctgatgttcgccatcatcaag
aagcgcgccaaggccggcgagcaggtgttcgccgacggcgtgctggagatcctgcccgac
ggcttcgggttcctgcgcagccccgacaccagctacaccgccagcaccgacgacatctac
atctcgcccagccaggtgcgccgcttcaacctgcacaccggcgacatgatcgagggcgag
gtgcgcatccccaaggacggcgagcgctactttgccctgaccaagctggacaaggtcaac
ggcaacccgcccgagcagaacaagcacaaggtgatgttcgagaacctgacgccgctgttc
cccaaggagcagatgaaactcgagcgcgacatcaagggcgaggagaacatcaccggccgc
atcatcgacatcatcgcccccatcgggcgcggacagcgcgcgctgatcgtcgcgccgccc
aagagcggcaagacggtgatgatgcagcacatcgcccatgccatcacctccaactatccg
gacgtgatcctcatggtgctgctggtagacgagcgccccgaggaagtgaccgagatgcag
cgctcggtgcgcggcgagatcatcgcctccaccttcgacgagccggccacgcgccacgtc
cacgtggccgagatggtgatcgagcgcgccaagcgcctggtcgaactcggccaggacgtg
gtcatcctgctggactccatcacccgcctggcgcgcgcctacaacaacgtcgtgccgtct
tccggcaaggtgctcaccggcggcgtggacgccaatgcgctgcagcgccccaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggctcgctcaccatcatcgccaccgcgctg
gtcgacaccggcagccgcatggacgaggtgatcttcgaggagttcaagggcacgggcaac
agcgagctgcacctgaaccggcgcctgtacgaaaagcgcgtgttccccgccatcgagctc
aacaagagcggcacgcgccgcgaagagctgctgctggcgcccgaggtactgcaaaagacc
cgcatcctgcgccagttcatgtacaacatggacgagatcgaatccatggagctcatgatc
aagaaaatgcgcgagaccaagagcaacgtcgacttcttcgaagccatgcgccgcggcggt
tga
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