Comamonas flocculans: FOZ74_11380
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Entry
FOZ74_11380 CDS
T06146
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cof
Comamonas flocculans
Pathway
cof03030
DNA replication
cof03430
Mismatch repair
cof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FOZ74_11380 (dnaE)
03430 Mismatch repair
FOZ74_11380 (dnaE)
03440 Homologous recombination
FOZ74_11380 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cof03032
]
FOZ74_11380 (dnaE)
03400 DNA repair and recombination proteins [BR:
cof03400
]
FOZ74_11380 (dnaE)
Enzymes [BR:
cof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOZ74_11380 (dnaE)
DNA replication proteins [BR:
cof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FOZ74_11380 (dnaE)
DNA repair and recombination proteins [BR:
cof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FOZ74_11380 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
ZapA
Motif
Other DBs
NCBI-ProteinID:
QEA13585
UniProt:
A0A5B8RZF2
LinkDB
All DBs
Position
2375878..2379420
Genome browser
AA seq
1180 aa
AA seq
DB search
MFVHLRLHSEFSVVDGTTRIDQVVKAAAGDGQGALALTDLNNLFGALKFYRAARAKGVKP
LLGAEVCLEDTAGGEPARIVLLVQDRQGYLNLCELLSRAWTQGVVRDQAVCRWPWLQELA
EGLIALSGAQAGPVGRALLAGNEAGAAEQALQLATAFPHRFYLELQRAGRDEDEAHVAAA
VQLAARLRLPVVATHPVQFLAPEDYDAHEARVCIAEGSTLGDRRRVRRFTREQYFKSDAQ
MRQLFADLPSAVANTVQIALRCSLTLELGKPQLPDFPIPAGMGVEDYFRHVAQEGLEARL
RHLYPDEAERRRQHPGYQERLDFELDIINKMGFPGYFLIVGDFIQWAKAHGCPVGPGRGS
GAGSLVAYALKITDLDPLHYKLLFERFLNPERVSMPDFDVDFCQANRDRVIDYVKERYGK
DAVSQIATFGTMAAKAAIRDAGRVMDMSYTFCDGISKLVPAKPGQTYTLAYPPEPKVEGD
KHNYALELEPQLMARVQGEEEVRTVVEMAQKLEGLTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSSSAVSQFDKDDVEAIGLVKFDFLGLATLTILELAREFIVARHQGQEDFAFENIPL
DDAPTYKLFQQGRTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFIN
RKHGKEEVLYPHPLVEPVLAETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKKAE
EMAKHRQIFREGAAKKGISEAKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHY
TAEFFCANMTIEMDDTDKLKVLHDDAIREGLSFEPPDINRGVYRFEPVTDQVIRYGLGAV
KGTGQQAIEAIVAAREGRGEGPQGGTRGPFRSLFDFCVRVDRTRINKRTVEALVKSGAFD
GLSRDRAALVASIDIAFDYAQAQLANANQGGLFDMMGEGAVGASDEEPPLADVLPWGVRE
RLMQEKTAIGFHLSGHLFDAVQAEVRRFAPTAIAELAGSRDSVVVAGIAAELRAINGQRG
KLTLFKLDDKSASIEVSADEAVAAAAAEALRDDEALVISARVQPDHFNGGLRLKAQQIWS
VAAARARFGRYLHVRAGAVLPDVADFVRRFPPRTEQTDDGHVLSQGLRVRLALRCEAEGE
AATVELQLGEASRFYPTDAALAAWSAQAGEGAVQVVYACA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgttcgtccatctgcgcctgcattccgagttttccgtggtcgatggcaccacccgtatc
gaccaggtcgtgaaggcggcggccggcgacgggcagggggcgctggcgctcaccgacctg
aacaacctgttcggcgcgctcaagttctacagggccgcgcgcgccaagggggtcaagccg
ctgctgggcgccgaagtctgcctggaagacacggcgggcggcgagcccgcgcgcatcgtg
ctgctggtgcaggaccgccagggctatctgaacctgtgcgagctgctctcgcgtgcctgg
acgcagggcgtggtgcgcgatcaggcggtgtgccgctggccatggctgcaggagctggcc
gaaggcttgattgcgctctcgggcgcgcaggccggcccggtgggccgtgcgctgcttgcc
ggcaacgaggccggcgccgcagagcaggcgctgcagctggcgacggcgtttccgcaccgc
ttttatctggagctgcagcgcgccggtcgcgacgaggacgaagcccatgtggcggccgcg
gtgcagctggccgcgcgcctgcgcctgcccgtcgtcgccacccatccggtgcagtttctc
gcgcccgaggactacgacgcgcacgaggcgcgcgtatgcatcgccgaaggcagcacgctg
ggcgaccgccggcgcgtgcgccgcttcacgcgcgagcagtatttcaagagcgacgcccag
atgcgccagctctttgccgacctgccctctgccgtggccaatacggtgcagatcgcgctg
cgctgcagcctcacgctggagctgggcaagccgcagctgcccgactttcccatccccgcg
ggcatgggcgtcgaggactactttcgccacgtcgcgcaagaggggctggaggcgcggctg
cgccatctctaccccgacgaggccgaacgccggcgccagcatccgggctaccaggagcgc
ctggatttcgagctggacatcatcaacaagatgggcttccccggctacttcctgatcgtc
ggcgacttcatccagtgggccaaggcccatggctgccccgtgggaccggggcgcggctcg
ggcgcgggctcgctcgtggcctatgcgctcaagatcaccgatctggatccgctgcactac
aagctgctgttcgagcgcttcctcaaccccgagcgcgtgtccatgcccgacttcgacgtg
gacttctgccaggccaaccgcgaccgggtgatcgactacgtgaaggagcgctacggcaag
gatgcggtgagccagatcgccaccttcggcaccatggccgccaaggcggcgatccgtgac
gcggggcgcgtcatggacatgagctacaccttctgcgacggcatctccaagctggtgccg
gccaagccggggcagacctacaccctggcctacccgcccgagcccaaggtggagggcgac
aagcacaactacgcgctggagctcgaaccccagctcatggcgcgcgtgcagggcgaggaa
gaggtgcgcaccgtggtcgagatggcgcaaaagctcgaagggctgacgcgcaacatcggc
atgcatgcgggcggcgtcctgatcgcgccgggcaagctcaccgacttttgcccgctgtac
cagcagccgggcagcagctcggcggtgagccagttcgacaaggacgacgtggaagcgatc
ggcctggtgaagttcgactttctgggcctggccacgctcaccatcctggagctggcgcgg
gagttcatcgtcgcgcgccaccaggggcaggaggattttgcgtttgaaaacattccgctg
gacgatgcgcccacctacaagctgttccagcagggccgcaccgaggcggtgttccagttt
gaaagccgcggcatgcaaggcatgctcaaggaggcgcgccccagccggctggaagacctg
attgccctgaatgccttgtaccgcccgggcccgatggacctgatccccagcttcatcaac
cgcaagcacggcaaggaagaggtgctctacccgcacccgctggtggagccggtgctggcc
gagacctacggcatcatggtctaccaggagcaggtgatgcagaccgcgcaggtgctgggc
ggctacagcctgggcggtgccgacctgctgcgccgcgccatgggcaagaagaaggccgag
gagatggccaagcaccgccagatcttccgcgaaggggcggcaaagaagggcatcagcgaa
gccaaggcggacgaggtcttcgacctcatggagaagttcgcgggctatggtttcaacaag
tcgcacgccgccgcctattcgctgctggcctatcacaccggctggctcaaggtgcactac
acggccgagttcttctgcgccaacatgaccatcgaaatggacgacaccgacaagctcaag
gtgttgcacgacgatgccatccgcgagggcctgtctttcgagccgccggacatcaaccgc
ggtgtctaccgcttcgagcccgtgaccgaccaggtgatccgctatggcctgggcgcggtc
aagggcacgggccagcaggcgatcgaggccatcgtcgcggcgcgcgagggccgcggtgag
gggccgcagggtggcacgcgcgggccgttcaggagcctgttcgacttttgcgtgcgggtg
gatcgcacgcgcatcaacaagcgcaccgttgaggccctggtcaaatcaggtgcttttgac
ggtctaagccgcgacagggctgcgctggtagctagcatagacatagcgttcgactacgct
caggcgcagctggccaatgccaaccagggcggacttttcgacatgatgggcgagggcgcg
gtgggcgcgagcgacgaagagccgccgctggccgacgtgctgccctggggtgtgcgcgag
cgcctgatgcaggagaaaaccgcgatcggctttcacctctcgggccacctcttcgatgcg
gtacaggccgaggtgcgccgcttcgccccgaccgcgatcgccgagctggccggcagccgc
gacagcgtggtggtggccggcatcgcagccgagctgcgcgcgatcaacggccagcgcggc
aagctcacgctgttcaagctcgacgacaagagcgccagcatcgaggtgtcggccgacgag
gcagtggcggcggccgccgccgaagccctgcgcgacgacgaggcgctggtgatcagcgca
cgcgtgcagcccgaccacttcaacggcggcctgcgcctgaaggcccagcagatctggagc
gtggcggccgcgcgcgcgcgctttggccgctacctgcacgtgcgcgcgggggcggtgctg
ccggacgtggccgacttcgtgcgccgctttccgccgcgcaccgagcagactgacgacggc
catgtgctgagccagggcctgcgcgtgcgcctggcgctgcgctgcgaagccgaaggcgag
gccgccacggtcgagctgcagctgggcgaggccagccgcttctaccccacggatgcggcg
ctggcggcgtggagcgcccaggcgggcgagggcgccgtccaggtcgtttacgcctgcgct
tga
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