KEGG   Comamonas flocculans: FOZ74_13435
Entry
FOZ74_13435       CDS       T06146                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
cof  Comamonas flocculans
Brite
KEGG Orthology (KO) [BR:cof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cof03000]
    FOZ74_13435
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cof02048]
    FOZ74_13435
Transcription factors [BR:cof03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    FOZ74_13435
Prokaryotic defense system [BR:cof02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    FOZ74_13435
SSDB
Motif
Pfam: HTH_3 HTH_31 Peptidase_M78 HTH_26 Sigma70_r4 HTH_23 YdaS_toxin HTH_37 HTH_28 HTH_19 HTH_29 UBA_6
Other DBs
NCBI-ProteinID: QEA13943
UniProt: A0A5B8RXU5
LinkDB
Position
2801670..2802788
AA seq 372 aa
MTERSAPFAPDWVLPPGDSILDLAEERGWTQTELARRLGYSEKHVSQLINGKVPVTVDAA
QRLERVLGSTMDFWLALEANFQKHKTRLEAAQRHAGWVPWLDELPLKELMSFGALVKQRV
DAKHKPGLVEACLRFFGVASPDDWRAHYGGMQMAFRRSRAEQCDVGAISAWLRLGEQQAE
KLDGPGYDKARFENALRTIRSLTCEPPEVFEPKMRKLLHDAGVLLVLVPAIPRAHVSGVA
RWLGPTRPLIQLSLYGKTNDKFWFTFFHEAAHILLHASSKEDKKSIFLDDPNAVHATDPR
EREANAWAGDWLIPVQAAARLSSLRSRDAVADFARQIDVHPGIVVGRLQHDGFIDPSWMN
GLKQSFRFRDAS
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgactgaacgcagtgctcctttcgcgccggactgggtcttgccccctggcgactccatt
ctcgatctggctgaagaacgcggctggacccagacggaactggcccgacgcctgggctac
agcgaaaaacacgtcagccagctcatcaacggcaaggtaccggtgacggtggatgccgcc
cagcggctggagcgcgtgctcggcagcaccatggatttctggctggcactggaggccaac
ttccagaagcacaagacacgcctggaggcggcgcagcgccatgctggctgggtgccttgg
ctggacgagttgccactcaaggagctgatgagttttggtgcccttgtcaagcagcgcgtg
gatgccaagcacaagccggggttggtcgaggcctgcctgcgctttttcggcgtagcctcg
cccgatgactggcgtgcccactatggtggcatgcagatggcctttcgccgcagccgcgcc
gaacagtgcgatgtgggcgcgatctcggcctggctgcgcctgggggaacagcaggccgag
aagctggatggccccggatacgacaaggcccgcttcgagaatgccttgcgcacgatccgc
agcttgacctgcgagccaccggaggtgttcgagccgaaaatgcgcaagctccttcacgat
gccggtgtgttgctggtgctggtgccggccattcctcgcgcccatgtcagcggtgtggcg
cgctggctggggccgacccggccgctcatccagctttcgctctacggcaagaccaacgac
aagttctggttcaccttcttccacgaggcagcgcacattctgctgcatgccagcagcaag
gaagacaagaagtccatcttcctcgatgatccgaatgccgtgcacgcgaccgatccccgt
gagcgtgaggccaatgcatgggcaggggactggctgatcccggtgcaggcagccgcacga
ttgtccagcctgcgcagcagggatgcggtggccgattttgccaggcagatcgatgtgcat
cccggcatcgtggtcgggcgcttgcagcatgacgggttcatcgatccatcgtggatgaac
ggtctgaaacagagcttccgtttcagggatgcatcttga

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