Comamonas flocculans: FOZ74_15975
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Entry
FOZ74_15975 CDS
T06146
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cof
Comamonas flocculans
Pathway
cof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FOZ74_15975 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cof03019
]
FOZ74_15975 (pcnB)
Enzymes [BR:
cof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FOZ74_15975 (pcnB)
Messenger RNA biogenesis [BR:
cof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FOZ74_15975 (pcnB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Motif
Other DBs
NCBI-ProteinID:
QEA14404
UniProt:
A0A5B8RZY9
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All DBs
Position
3329795..3331330
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AA seq
511 aa
AA seq
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MIKTFIDKLLGKRAGAKNPFGKREEVPASVHHIDPALVDKRALEVVATLKKAGHEAYIVG
GAVRDLLLGLKPKDFDVATDATPEQVKALFRRAFIIGRRFRIVHVVHGRGREHEVIEVST
FRAYLDHAAAEHVQGNEKTSKAELSGMRHAVDASGRVLRDNVWGPQEEDAARRDFTVNAM
YYDPQTQIVVDYHKGIQDAQKRVLRMIGDPELRYHEDPVRIIRAARFAAKLDALGFTLEP
RTARPLVACEHLLRDIPQSRLFDEMLKLLQTGHALASVAQLRKLGLEKGIYPLLDIVVER
AALPLVRGVLQDTDRRVKEGKAVAPSFLLSCVLWPDVKAGWERHQQAGEHPFPALQAAID
EVFAQRIGDVSGRGKLAADMREIWVMQPRFERRTGHGAHSMVAHIRFRAGFDFLRLRADS
GEVAEELVSWWQQFSLADEERRSDMLDQLRDEQRQRSRQRKSGPARTGSSAPESEPDASA
EGTAEPAPRKRRRRRRKPASADASQGTPREP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaccttcatagacaaactgctgggcaagcgcgccggcgcgaaaaaccctttc
ggcaaacgcgaggaggtgccggcgagcgtgcaccacatcgacccggccctggtggacaaa
cgggcgctggaggtggtggccacgctgaagaaggcgggccacgaggcctacatcgtcggc
ggcgcggtgcgcgacctgttgctgggtttgaagcccaaggacttcgacgtggccaccgac
gccacacccgagcaggtcaaggcgctcttccggcgcgccttcatcatcgggcggcgcttt
cgcatcgtgcacgtggtgcatgggcgcgggcgcgaacacgaggtgatcgaggtgtccacc
tttcgtgcctacctcgaccatgcggcggccgaacatgtgcagggcaatgaaaagaccagc
aaggccgagctgtcgggcatgcgccacgcggtggacgcgtcggggcgggtgctgcgcgac
aacgtctgggggccgcaggaagaggacgcggcgcggcgcgacttcaccgtcaacgcgatg
tactacgacccgcagacgcagatcgtggtggactaccacaagggcatacaggacgcgcaa
aaacgcgtgctgcgcatgatcggcgaccccgagctgcgctaccacgaagacccggtgcgc
atcatccgcgcggcgcgttttgccgccaagctcgatgcgctcggcttcacgctggagccg
cgcaccgccaggccgctggtggcctgcgagcacctgctgcgcgacatcccgcaaagccgg
ctgttcgacgaaatgctcaagctgctgcagaccgggcatgcgctcgcgtcggtggcgcag
ctcaggaagctggggctggaaaagggcatctacccgctgctggacatcgtggtcgaacgc
gccgctctgccgctggtgcgcggcgtgctgcaggacaccgaccggcgcgtcaaggaaggc
aaggcggtggcgcccagcttcctgctgtcgtgcgtgctctggcccgacgtcaaggccggc
tgggagcgtcaccagcaggccggcgagcaccccttcccggcgctgcaggcggccatcgac
gaggtcttcgcccagcgcatcggcgacgtgtccgggcgcggcaagctggccgcggacatg
cgcgagatctgggtcatgcagccgcgctttgagcggcgcaccggccacggcgcgcacagc
atggtggcgcacatccgctttcgcgccggcttcgacttcctgcgcctgagggccgacagc
ggcgaggtggccgaagagctggtcagctggtggcagcaattctcgctggccgacgaagag
cggcgcagcgacatgctcgaccagctgcgcgacgagcagcgccagcgctcgcgccagcgc
aagagcggcccggcgcgcacgggcagcagcgcgcccgagtccgagcccgacgccagcgct
gagggcactgccgagcccgcgcccaggaagcgccgccggcgccggcgcaagcccgccagc
gccgacgccagtcagggcacgccgcgcgagccgtga
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