Cohnella candidum: EAV92_03320
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Entry
EAV92_03320 CDS
T05696
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_03320
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EAV92_03320
Archaeal homologous recombinant proteins
EAV92_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_15
AAA_29
nSTAND3
DUF1664
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AYQ71685
UniProt:
A0A3G3JTY5
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All DBs
Position
732995..736087
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AA seq
1030 aa
AA seq
DB search
MKPIKLTMTAFGPYKDIEVIDFTELKEHRLFLVSGNTGAGKTSIFDAICFSLYGEASGED
RNDVRMLRSQFASDDVYTAVEFEFEIKRRTYRILRQLSHVKQGNKSATGEKYEFVETTGG
RETMMVDRYMVRQINERVQSLVGLTKDQFGQIVMLPQGEFRKLLTSDTENKEEILRRIFR
THLYKYVTEYLNEKRKTAQNDCDLAKRDLDAQTMNLKLAISQREDSELHRVLGGELYNTH
QVLEALEAEIGFYAAAKESRRTKLEAEIKLQRELTEKYHQAAGLNEQFDILSRKTTEKIN
LESRIPEFEQKRQRLAWAEKTLPLQVQERHVVGAREDVVAKERSMASSREELRLAEEGFR
LTEEAYRLEEKQEGRREQLVRELERLGRDLPTVQALESHKTRVCRLEKEAAQAEEDLRAA
DVRASSRMEEKKALTERIRKLEESVRPLPEMNQRLERMRSEATLLRDCVQWAKELDNLRS
EERKQKELHDRSAREYAQLEGRWLEGQAGLLAGHLHDGAPCPVCGSAEHPRKAAVSADMP
SREELEQQRNRKAELESVYLAGKTKREHLEAQLQAKTAEAAALGYAADDLESSYLTLVET
GKSISAGVKQMQADQAVLDECKQTLDQTEKQLETESADKERRAAFHQERRTAYLTDKALY
EQALNSVPEELRSLETLQRRLKETEAEKQRAETAWRLAQERFQQAGAKLAATQAGRAAAE
KQLEEARARLAQAEDEFRGEIARAGFETAEAYQQAKMPDDARAEMKRDIDRFHAELATVR
KQVEELEAMLQGKERADLAALAAEMERLDRQVELTRHSLAQAQDHYDKATEGKEKILSAE
QRWKEAEKDFQLVKDLYDVVRGENRFKISFERFLLVEFLDRILQAANLRLQTISGGQFYL
ARSRRQEKHGRQSGLGLDVYDTYTEQFRDVKTLSGGEKFNASLCLALGMADVIQAYEGGI
SLETMFIDEGFGSLDEESLNKAIDTLIQLQQTGRMIGIISHVQELKQAIPAILEVKKASE
GHSYTRFRVS
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatcaaactcaccatgacggcgttcggtccgtataaggacatagaagtcatc
gacttcacggaactcaaggaacaccgcttgtttctcgtttcgggcaatacgggagccggc
aaaacgtccattttcgatgccatctgcttctcgctgtacggggaagcgagcggagaagac
cggaacgacgtccgcatgctgcgcagccaattcgcttccgacgacgtctatacggccgtt
gaattcgagttcgagatcaaaaggcgcacgtaccgcatattgaggcagctgtctcacgtg
aagcagggcaacaaaagcgcgacgggcgagaaatacgagttcgtggaaacgaccggcggc
cgggaaacgatgatggtcgaccgctatatggtccgccagatcaacgagagggtgcaaagc
ctggtcggtctcaccaaagaccagttcggccagatcgtgatgcttccccaaggggagttt
cgcaagctgctgacgtcggatacggaaaataaagaggaaattttgcggcggattttccgc
acgcatctgtataaatacgtcaccgagtatctcaatgagaaacggaaaaccgcgcaaaac
gattgcgacctggcgaagcgcgacctcgacgcgcaaacgatgaacctgaagctggcgata
tcccagcgggaggattccgagcttcaccgggtgctgggcggggaactttacaacacccat
caggttctcgaggcgctggaggcggaaatcggtttttacgccgcggcgaaagaaagccgc
cggacgaagctggaggccgaaatcaagctgcagcgagagctcacggaaaagtaccatcaa
gcggcgggcttaaatgaacaattcgatatcctgagccggaagacgacggaaaagatcaac
ctggagagccgaattcccgagttcgaacagaagcggcagcgtttggcgtgggccgaaaag
acgcttccgctgcaagtgcaggagagacacgtcgtcggcgcccgggaggatgtcgtcgcg
aaagaacggtcgatggcgtcttctcgggaagagctccgtttggcggaggaggggttccgt
cttacggaagaagcttaccggctggaggagaagcaagaaggacggcgggagcagctcgtc
cgggagttggaacggctgggacgggatttgccgacggtccaagccctcgaatcccacaaa
acgcgcgtctgccggctggagaaagaggcggctcaagccgaagaggacctgagggctgcg
gatgtccgggcgtcctcccggatggaggaaaagaaggcgctgacggagcgcatccgaaag
ctggaagaaagcgtgcggccgctgccggaaatgaatcagaggctggagcgcatgcgttcg
gaagcgaccctgctgcgcgattgcgtccaatgggccaaggagctggacaacctgcgttcg
gaagagcgcaagcagaaggagcttcacgaccggagcgcaagggagtatgcgcagctggaa
ggccgctggctggaagggcaggccggcttgctggccggccatctgcacgacggggcgcct
tgccccgtgtgcggcagcgccgagcacccgcggaaagcggccgtgtccgcggatatgcct
tcgcgggaggagctggaacagcagcggaaccgcaaagccgagcttgagtccgtctatttg
gccggaaagacaaaacgcgagcatctggaggcgcaactgcaagccaaaacagccgaagcc
gccgcgctgggctacgccgccgacgatctcgagagctcgtacctcaccctggtggaaaca
ggcaaaagcatcagcgccggagtcaaacagatgcaagcggatcaggcggttttggatgaa
tgcaaacagacgctggatcaaacggaaaagcagctggaaaccgagtcggccgataaggaa
cggagagcggcctttcatcaagaacgccgcacggcatacttaacggataaggcactttac
gagcaggcgctgaacagcgtgccggaggagcttcgttccttggagacgctgcaacggcgg
ttgaaagagaccgaggcggagaagcaaagagcggaaacggcttggcggctggcccaggaa
cggttccagcaagcgggagccaagctggccgcaacccaagcgggccgggccgccgccgag
aagcagctggaagaagcgcgcgcccggttggctcaagccgaggatgagttccgcggcgag
atcgcgcgcgcgggtttcgagacggcggaagcgtaccagcaagcgaaaatgccggatgac
gcacgggcggaaatgaagcgggacatcgaccgcttccatgccgagctggcgaccgtgcgg
aagcaggtcgaggaactggaagcgatgctccaaggcaaagagcgggcggatctcgccgct
ttggcggccgaaatggagcggctcgaccggcaggtggagctgacgcgccactcgctcgcg
caagcgcaggaccattacgacaaagcgacggaaggcaaggagaagatcctgtccgccgag
caacggtggaaagaggccgaaaaagacttccaactcgtgaaggatctgtacgacgtcgtc
cgcggggaaaatcggtttaagatatcgttcgaacggttcctgctggtcgagtttctggac
cgcatcctccaggcggcgaatcttcggctgcagacgatttccggcgggcaattttacctg
gcgagaagccgaaggcaggagaaacacggcaggcaaagcggcctcggcctcgatgtatac
gacacgtacacggagcagttccgggacgtgaagacgctgtccggcggcgagaaattcaac
gcttcgctgtgccttgctctaggcatggccgacgtgatccaggcatacgaaggcgggatt
tcgctggagacgatgtttatcgacgaaggcttcggatcgctggacgaggagtcgctgaac
aaggcgatcgacactttgatccaattgcagcagacgggacgcatgatcggcatcatctcg
cacgtgcaggagctcaagcaggcgatccccgccattttggaggtcaagaaagcctccgaa
ggacacagctatacccggtttcgggtgagctga
DBGET
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