Cohnella candidum: EAV92_03630
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Entry
EAV92_03630 CDS
T05696
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_03630 (addB)
Enzymes [BR:
coh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAV92_03630 (addB)
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EAV92_03630 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AYQ71741
UniProt:
A0A3G3JV69
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All DBs
Position
799168..802698
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AA seq
1176 aa
AA seq
DB search
MSLRLVTGRSGSGKSRFVMDEIRGKLREDPQGSPLVLLVPEQATFEAERTMASTPGLGGF
LRVQVLSFRRLAYRVLQETGGLAVIPIHENGKAMLLHKVLETRREQLKLFRGGPSEAGLI
ARLNELLTEWKRYAVSADRVADAAGGGFGGAETPLLADKLHDLSLIYGDIEKELAGRWMD
GEDMLARLAVGAASSDWLAEAEIWLDGFHGFTPGELAVIEGLLRRAKRVTVALCVDKPFG
AGERPDELHPFHPTAETSARLCELAVAANVPVEPPVVLDPPSGPRFAGNPALAFLERNWE
RRTAVWQDDPEVLRPEHPSCGLSLHAASNRRAEAEAAVRDMLRRVREEGFRWRDLAVFVR
RMEDYADLLSTVLSDYGIPYYLDGKAPVAHHPLVEFIRSALECAVGGWKSEAVFRCAKTD
LLGTPERRVTRGEIDRLENYALAAGIDGWRWHDDRLWRPLSRGDLEEEGEAGARRESEAD
ELIRIRDALLTPVRTLEKRLNKADSVRALCEALYGFLEETGAADVLESWSLADAAAGQPG
RAVMHRPLWDGVMNVLDQLVELMGDAKPDVPLFAGMVDSGLEELKLGAVPPSLDAVLIGS
PERTRSDRLKIVYFLGVNDGVLPMRIPENGLLSEPERERLSEAGLEMAPGAKRRLLDERF
LAYLAFATPSVHLWVSWPLADDEGSGLLPSEWIRRLRRRFPGLPVTLEAAEPQPGDPEEK
QLDFAVQPGRALTHVLTRLRQLRGGESPSPGWWSVYNWLMEREEWRGRLSRLLVSLRYKN
EERPLAAETSSLLYGDRLLASVSRMERFVACPFRHFASHGLRLRERRLYRVDAPDIGQLF
HAALRQTTEKLFAPDAGSVDAAVWQAEAAAAVERLLPRVQSQILLSSHRHGVMARKLRDI
VAQASAMLGEQARLSAFRPVGLELGFGPDAPLPPLSLDLGNGRAMDIAGRIDRVDAAETP
EGLLLRIMDYKSGAVKLKLDEVAHGLTLQMLTYLDVVVTHAPHWLGKPANPAGVLYFHVR
NPLLPTANGMSPAEAQAAMLKQFRMQGLVLADGETVKLMDTSLEAGPKSTVIPVEFKKDG
TFSARSQIADRSQWDVLRSSVRGQIRKIGKRIVEGDVAIAPYRMEKRSPCAHCEYRPVCQ
FDPELDGNRYQVLSKPGSREELWRKLGEEAERREPE
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcggctcgtgacgggtcgatccgggagcgggaaatcgcgtttcgtgatggac
gaaatccgcggcaagctgagggaggacccgcaaggctccccgctggtgctgctcgtgccc
gagcaggctacgttcgaagcggaacggacgatggcttcgacgccgggattgggcggcttc
ctccgggtccaggtgctcagctttcgcaggctggcgtaccgggtgctgcaggaaaccggc
ggactggccgtcattccgatccatgaaaacggcaaagcgatgcttttacataaagttttg
gagactcggcgcgaacaactgaagctgtttcggggaggcccttcggaggccgggctcatc
gcccggttgaacgagctgctgacggagtggaaacggtacgcggtgtctgcggaccgggtg
gcggacgcggccgggggcggtttcgggggagcggagacgccgctgctggcggacaagctg
cacgatctttccctgatttacggagacatcgaaaaggagctcgcgggccgctggatggac
ggcgaggacatgctggcgagattggccgtcggcgcggcttcttcggattggctggccgag
gcggaaatttggctggacggtttccatggcttcacgccgggtgagctggccgtaatcgaa
gggctgcttcgccgggcgaagcgggtgacggtcgccttgtgcgtggacaagcctttcggg
gcgggcgaacggccggacgagctgcatccgttccatccgacggccgaaacgtcggcgcgc
ctgtgcgagcttgccgtcgcggcaaacgttccggtcgagccgccggtcgtactggatccg
ccttcggggccgcggttcgccggcaatccggcgctcgcgttcctcgagcggaattgggaa
cggagaaccgccgtatggcaagatgaccccgaggtgctccgtccggagcatccttcgtgc
ggcctgtctcttcatgccgcgtcgaaccggagggcggaagcggaagccgccgtccgcgac
atgctgcgccgcgtgagggaggaaggcttccgttggcgagatttggcggtgttcgtgcgc
cggatggaggattacgccgaccttctgtccaccgttttatcggactatggaatcccgtac
tatttggacggcaaagctcccgtcgcccatcacccgctcgtggaattcatccgttcggcg
ctcgagtgcgccgtgggcggctggaaatccgaagcggtgttccgctgcgccaagacggac
ctgctcggcacgccggagcgccgggtcacccggggagaaatcgaccggctggagaactac
gcgctcgcggccggcatcgacggctggagatggcatgacgaccggctttggcgtccgctt
tcccgaggagacctcgaggaggaaggtgaagccggggcgagacgggaatcggaggccgat
gagctgatccgcatccgtgacgcgttgctgacgccggtgcggacgctggagaagcgcctg
aacaaagcggattcggtgcgggcgttatgcgaagcgttgtacgggttcctggaggagacg
ggggccgccgacgtgctggaaagctggagccttgcggacgccgccgccgggcagcccggc
cgtgccgtcatgcatcgcccgttgtgggacggcgtcatgaacgtgcttgaccagctcgtg
gaattgatgggcgacgccaaaccggacgtcccgctgttcgccggcatggtcgattccggc
ttggaggagctcaagcttggcgccgtgccgccttccttggatgccgtgctcatcggcagt
ccggaacggacgcggtccgaccggctcaaaatcgtttatttcctaggcgtgaacgacggg
gtgctgccgatgcggattcccgaaaacggcctgctttcggagccggaacgggaacggttg
tcggaggcggggctggagatggcgccgggcgccaaacggcgcctgctggacgagcggttt
ctcgcctatttggcgttcgcgacgccgtccgtccacctctgggtgtcctggccgctcgcg
gacgatgaaggctcgggcctgctgccgtccgaatggatccgccgtctgcggcggcgtttc
cccggccttcccgtgaccctcgaagccgcggaaccgcagccgggggatcccgaggagaaa
cagctcgacttcgcggtgcaaccgggccgcgcactcacgcacgtcctgacgcggctgcgt
cagctgcgcggcggggaaagcccttcgccgggctggtggtccgtttacaattggctgatg
gaacgcgaggaatggcggggacgtctgagccgcctgctcgtttctttgagatacaagaac
gaagaacggccgctggccgcggagacgagctcgctgctgtacggagaccgcctgcttgcc
agcgtgtcccgcatggagcgtttcgtcgcttgcccgttccggcatttcgcttcccatggg
ctccggctgcgcgaacgccgcctgtaccgggtcgacgctccggacatcgggcagctgttc
catgccgcgctgcggcaaacgacggagaagctgttcgcgcctgatgccggttccgtggac
gcggcggtttggcaggccgaagctgcggctgcggtagagaggctgctgccgcgcgtgcaa
tcgcaaatcttgctgtcttcccatcgccatggggtgatggcccgcaagctgcgcgatatc
gtcgcccaggcgtccgccatgctcggcgaacaggcccggctgtcggctttccggccggtc
ggcttggagctgggcttcggcccggacgccccgctgccgccgctttcgctcgatctgggc
aacggccgggcgatggacatcgccggacggatcgacagggtcgacgcggcggagacgccc
gaaggtttgctgctgcggatcatggactacaaatcgggcgcggtgaagctaaagctcgac
gaagtggcgcatggcctgacgctccagatgctaacgtacctggacgtcgtcgtgacccac
gcgccgcattggctcggcaaacccgcgaaccccgcgggagtgctttatttccacgtccgc
aatccgctgctgcctacggcgaacggcatgtcgcccgccgaagcgcaggctgccatgctt
aagcaattccggatgcagggactggtgctggcggacggcgagacggtgaagctgatggac
acatcgctcgaagccggcccgaaatcgacggtcattcccgtcgaattcaagaaggacggc
acgttttccgcccgatcccagatcgcggaccgcagccaatgggacgttttgcggtcttcc
gttagaggacagatccggaaaatcggcaaaaggatcgtggagggcgacgtcgccatcgct
ccgtatcggatggagaagcgcagcccttgcgcgcattgcgagtatcggccggtatgccag
ttcgatcccgaactggacggcaaccggtatcaagtgctgtccaagccgggcagccgcgag
gaattgtggcggaagctcggagaggaagcggaaaggagggagccggaatga
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