Cohnella candidum: EAV92_04950
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Entry
EAV92_04950 CDS
T05696
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
coh03032
]
EAV92_04950 (topA)
03400 DNA repair and recombination proteins [BR:
coh03400
]
EAV92_04950 (topA)
Enzymes [BR:
coh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EAV92_04950 (topA)
DNA replication proteins [BR:
coh03032
]
Prokaryotic type
DNA Topoisomerases
EAV92_04950 (topA)
DNA repair and recombination proteins [BR:
coh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EAV92_04950 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
DUF3656
HVO_2753_ZBP
Lar_restr_allev
Auto_anti-p27
Toprim_3
Toprim_2
DinB
Motif
Other DBs
NCBI-ProteinID:
AYQ75501
UniProt:
A0A3G3K5P4
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All DBs
Position
1070434..1072530
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AA seq
698 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKFIVKASMGHIRDLPKSQIGVEIENEFQPKYITIRGK
GNVLKELKDASKKVKKVYLAADPDREGEAIAWHLAHYLELDEKDACRVVFNEITKQAVKD
AFKTPRPIDMDLVNAQQARRVLDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKLIMDREN
EIKAFVPEEYWSITAHLMKESASFEAKFHSVNGEKKELKSEDDVKEVLSRIGQTPFKVGE
VKEKERQRNPSPPFITSSLQQEAARKLNFRASKTMQVAQQLYEGVDLGKEGTVGLITYMR
TDSTRISPVAQEEAKAFIGEKYGAAYVPETPRVYTKKNSTAQDAHEAIRPTSVLREPDSV
KSYLSRDQLRLYKLVWDRFVASQMSSAVLDTMTVDLNNGPVQFRAAGSKLKFPGFMKIYV
EGNDDGSTEEDRLLPPLTTGETVTTSQIDPKQHFTQPPPRYTEARLVRTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFVPTELGELINQVMEEFFPEILDAEFTAHMEGNLDHVEEG
DENWVHVIGDFYKSFEKRLIVAEDEMKEIEIRDEPSDEICDKCGNPMVYKMGRFGKFLAC
SGFPECRNTKPIVKDTGVGCPKCGKGQIVERRSKKGRLFYGCDRYPECDYVSWDKPVAKP
CPDCGGMMIEKRSRGNVTWHCTACGHDESPPEADEAAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattccctcgttatcgttgaatccccggccaaagccaagacgatcggcaaatac
ttgggcagcaagttcatcgtcaaggcgtcgatgggccacattcgagatctgcccaagagt
cagatcggcgttgaaatcgaaaacgaattccaaccgaaatacatcacgatacgcggcaaa
ggcaacgttttgaaagaattgaaggacgcaagcaaaaaggtgaaaaaagtgtatctcgcg
gctgaccctgatcgcgaaggggaagcgatcgcctggcacttggcgcattacctggagttg
gacgagaaggacgcctgtcgcgtcgtgttcaacgaaatcacgaagcaagcggtcaaagac
gcctttaaaaccccgcgtccgattgacatggatcttgtgaacgcgcagcaagcaagacgc
gtgctggaccgactggtcggctacaagatcagcccgctgctctggaagaaggtcaagaaa
ggcctcagcgccggccgcgtgcaatccgtcgcggtgaagctgatcatggaccgcgagaat
gagatcaaagcgttcgttccggaagaatactggagcatcaccgcgcatttgatgaaagag
agcgcgtcgttcgaagcgaagttccactccgtgaacggcgagaagaaagagctcaaaagc
gaagacgacgtcaaggaagtgctctcccgcatcgggcaaaccccgttcaaggtgggagag
gtcaaagaaaaggaacggcagcgcaatccatcaccgccgttcatcaccagttcgctgcag
caggaagccgcccgcaagctgaatttccgcgcctccaaaacgatgcaggtcgcccagcag
ctgtacgaaggcgtcgacctcggcaaggaaggcaccgtcggtctcattacttacatgcgt
acggattccacgcggatttcgcccgtggcccaagaagaagcgaaagcgttcatcggtgag
aagtacggggccgcttacgttcccgaaaccccgcgtgtctacacgaagaaaaactcgacc
gcgcaggatgcgcacgaagcgatccgtccgacgtccgtgcttcgggaacccgattccgtg
aagtcgtatctgtcccgcgaccagctccggttgtataaattggtctgggatcgtttcgtg
gcgagccaaatgtcctccgccgtgctggacacgatgaccgtggatttgaacaacggaccg
gtgcaattccgcgcggccggatccaagctcaagtttccggggttcatgaaaatctacgtc
gaaggcaacgacgacggatccacggaggaggaccgcctgcttccgcctttgacgacggga
gaaacggttacgacgtcgcaaatcgatccgaagcagcatttcacgcaaccgccgccgaga
tatacggaagctcgtctcgtccgtactttggaagagctcggcatcggccgcccgagcacg
tatgcgcctacgctggagacgatccagaaacgcggctacgtggcgatcgaagagaagaaa
ttcgttccgaccgaactgggagaactgatcaaccaggtcatggaagagttcttccccgaa
atcctcgacgcggagttcaccgcccacatggaagggaacctcgaccatgtcgaggaaggc
gatgagaattgggttcacgtcatcggcgatttctacaagtctttcgaaaaacggctgatc
gtggcggaagacgaaatgaaggaaatcgaaatccgcgacgagccgtcggacgaaatctgc
gacaaatgcggcaacccgatggtgtacaagatgggccgcttcggcaagttccttgcttgt
tccgggttccccgaatgccggaatacgaagccgatcgtcaaggataccggcgtcggctgt
cccaaatgcggcaaaggccaaatcgtggagcggcgcagcaaaaaaggacggttgttctac
ggctgcgaccgctacccggaatgcgattacgtatcctgggataagccggtggccaaacct
tgtccggattgcggcggcatgatgatcgagaagcgcagccgcggcaacgtgacttggcat
tgcacggcatgcgggcacgacgaatctcctccggaagcggacgaagccgcggaataa
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