Cohnella candidum: EAV92_05135
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Entry
EAV92_05135 CDS
T05696
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
coh
Cohnella candidum
Pathway
coh02020
Two-component system
coh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EAV92_05135
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EAV92_05135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
coh03021
]
EAV92_05135
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
coh02035
]
EAV92_05135
Transcription machinery [BR:
coh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EAV92_05135
Bacterial motility proteins [BR:
coh02035
]
Flagellar system
Flagellar assembly proteins
Stator
EAV92_05135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Sigma70_ECF
HTH_16
PhyR_sigma-like
HTH_38
HTH_23
PriX
Motif
Other DBs
NCBI-ProteinID:
AYQ72005
UniProt:
A0A3G3JUU6
LinkDB
All DBs
Position
1104979..1105767
Genome browser
AA seq
262 aa
AA seq
DB search
MVDQPRSRLSHQDLWMRWKEAGDPDARKLLIEHYLPLVEYVSSRMAASLPKNVTKDDLAS
HGVMGLIDAIEKFDYRRGLQFETYASWRIRGAIIDGLRHGDWVPRSVRDKAKKMEDAYAV
LEQRHLRSATDEEVCGYLNITEKEFQQMLQEVAVAAVCSLEDPIREEESETRLSLLVDDK
ALNPESKVHETYLKETLMQGLERLTEKERTVVSLFYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGALAKQKEQLLHNG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcaaccccgatccaggttatcccaccaagatttgtggatgcgctggaaagaa
gcaggcgatccggacgccagaaagctgctgatcgagcattatttgccgttagtggagtat
gtttcgagccgaatggccgcgtctttgcccaaaaacgtaaccaaagacgatttggccagc
catggcgtcatggggcttatcgacgccatcgagaaattcgactatcggcgagggttgcaa
ttcgaaacctacgcctcttggcgcattcgcggcgcgatcatcgacgggctgcgccatggg
gactgggttcctcgatcggttcgtgacaaagcgaaaaaaatggaagacgcatacgccgtc
ctggaacagcggcatctccgctcggcgacggacgaggaagtgtgcggctacctgaacata
accgagaaagagtttcagcaaatgctgcaggaagtggcggtcgcggcggtgtgctccctg
gaggatccgatccgggaagaagagtccgagacccgattgtcgctgctcgttgacgataag
gcgctgaatccggaatccaaagtccatgagacgtacttgaaagagacgctcatgcagggt
ttggaacgattgacggaaaaagaacgcacggtcgtctccttgttttactacgaggacctt
tcgttaagcgaaatcgccgaggtgatgtccctgtcgccctcccggatctcccagcttcat
tcgaaagcgattttgaggctccggggcgcgctcgccaaacaaaaggaacaactgctgcac
aacggatga
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