Cohnella candidum: EAV92_05250
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Entry
EAV92_05250 CDS
T05696
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
coh03016
]
EAV92_05250 (truB)
Enzymes [BR:
coh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EAV92_05250 (truB)
Transfer RNA biogenesis [BR:
coh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EAV92_05250 (truB)
Prokaryotic type
EAV92_05250 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AYQ75503
UniProt:
A0A3G3K4T0
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All DBs
Position
1129725..1130666
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AA seq
313 aa
AA seq
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MDGVLAIWKPAGWTSHDVVAKARRLLGVKRIGHTGTLDPAVTGVLPLCVGRATRFVEYLQ
EMPKTYEAVLRFGLATDTEDLEGEVIEEADASHLSEERIRDAVLSFVGEIEQIPPMMSAV
KVNGKRLYELAREGVTVERKPRKATIHDIDILHVAAGSPRPEIRFSVRCSKGTYIRTLCV
DIGRRLGVPAVMASLIRTESAGLRRQDCVTLEEIPALVQSGELAEKLIPGDRLLTHLPRT
TAASLECLHAIQGKPIPAARLQPVPSGSRLWLVDREDGGFLGIFEWEEESGRLRAVKVFP
PEGEREPDGKEAD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggacggagtcctggcgatttggaaaccggcaggctggacgtcgcacgacgtcgtggcc
aaagcccggcggctgctcggcgtgaagcgcatcggccatacggggaccctggatcccgcg
gtgaccggcgtgcttccgctttgcgtgggccgggcgacccggttcgtggaatatttgcag
gaaatgccgaagacgtacgaagcggtgctgcggttcgggctcgcgaccgacaccgaggat
ctcgaaggcgaggtcatcgaagaggccgacgcttcccatctatccgaggagcgaatccgg
gatgcggtgctctctttcgtaggcgaaatcgaacagataccgccgatgatgtccgccgtg
aaggtgaacggcaagcggctttacgagctcgcgcgcgaaggcgtgaccgtcgagcgcaaa
ccgcgaaaagcaacgatccacgacatcgacatccttcacgtggccgcgggtagccctcgt
ccggagatccggttttccgtccgttgctccaaaggcacgtatatccgtacgctttgcgtg
gacatcggccggcgtttgggcgtgccggccgtcatggcatcgctgatccgcaccgagagc
gccggacttcggcgtcaagattgcgtgaccctggaggagatccccgcgctggtccagagc
ggagagcttgcggaaaagctcattcccggggatcgcctgctgacgcatctgccgagaacg
accgcggcttcgctcgagtgccttcacgcgatccaaggcaagccgattccggcagcgcgg
ctgcagccggtcccgtcgggatcgcgcttgtggctcgtggaccgggaggacggcggtttt
ctcggcattttcgaatgggaagaggagtccggccggcttcgggcggtgaaagtgtttcct
cccgaaggggaacgggagccggacggcaaagaggcggattga
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