KEGG   Cohnella candidum: EAV92_05310
Entry
EAV92_05310       CDS       T05696                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
coh  Cohnella candidum
Pathway
coh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:coh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EAV92_05310
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:coh03019]
    EAV92_05310
Messenger RNA biogenesis [BR:coh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EAV92_05310
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: AYQ72038
UniProt: A0A3G3JUW6
LinkDB
Position
1142712..1144391
AA seq 559 aa
MSKKNNADKLLIFALGGVGEIGKNMYCIQYANDIVVVDAGLKFPEEEMLGIDVVIPDITY
LTDNREKVRGILVTHGHEDHIGGLPYVLKHLNVPVYGTKLTLGLIENKLKEAGLLGDTKR
ILINADSELTLGTIKASFFRTNHSIPDSVGVCLETPEGIVVHTGDFKFDHTPVNEQYADL
QRMAEIGKRGVLALLSDSTNAERPGFTPSESNIGREFEEIFRRAKQRVVVATFASNVHRI
QQVIDAAMETRRKMTVIGRSMVNIVTIASELGYLNIPEGMLIEPEEVNKLPADRVVVLST
GSQGEPMSALTRMARSTHRKIDILPGDTVVISATPIPGNEKYVGRTVDELMRLGASVIYG
PGSVSGVHVSGHGSQEELKLMLNLIRPEYFIPIHGEYRMLRHHGLLAEAVGIEKDKIFLI
DNGDTVEFQNGVGRKAGKIPAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQ
DGTILSGPDIISRGFVYVRESEGLLEEANRIVTGTLHKLMNENVNEWASLKTNVKDALGR
FLYEQTKRRPMILPIIMEV
NT seq 1680 nt   +upstreamnt  +downstreamnt
ttgtccaagaagaacaacgcagacaaattgctgatttttgccctgggaggcgtcggcgag
attgggaaaaacatgtactgcatccagtacgcgaacgacatcgtcgtcgtggatgcgggc
ctgaaattcccggaagaggaaatgctcggcatcgacgtcgtcattccggatatcacgtac
ttgacggataaccgcgaaaaagtaagagggatcctcgttacccacgggcatgaggaccac
atcggcggcctgccttacgtcctgaaacatctgaacgtcccggtgtacggaaccaagctg
acgctcggcctgatcgagaacaagctgaaggaagcgggactgctcggagacacgaagcgc
attttgatcaacgccgactcggaattgacgctcggtacgatcaaagccagctttttccgc
acgaaccacagtattccggactccgtcggagtctgtctggaaacgccggaaggcatcgtc
gttcatacgggcgactttaaattcgaccatacgccggtgaacgagcagtacgccgacctg
cagcggatggcggaaatcggcaagcgcggcgtcctcgccctgctgtcggacagcacgaac
gcggaacgccccggcttcacgccgtcggagagcaacatcggccgtgaattcgaggagatt
ttccgccgtgccaagcagcgcgtcgtcgtggcgacgttcgcttcgaacgtgcaccggatc
cagcaggtcatcgatgcggcgatggaaacccggcgcaagatgacggtcatcggccgcagc
atggtcaacatcgtgacgatcgcttcggagctcggttacctgaacattccggaaggcatg
ctcatcgagcctgaagaagtgaacaagctccccgcggaccgcgtcgtcgttctgtcgacg
ggcagccaaggcgagccgatgtccgcgcttacgcgaatggctcgctctacgcatcgcaag
atcgacattttgccgggggatacggtcgtcatttcggcgacgccgatcccgggcaacgag
aaatacgtcggccgcacggtcgatgaattgatgcggctcggcgccagcgtcatttacgga
ccgggctcggtatccggcgtgcacgtttccggccacggcagccaggaagagctgaagctg
atgctcaacctgatccgtccggaatatttcatcccgatccacggcgaataccggatgctg
aggcatcacgggttgcttgccgaggccgtcggcatcgagaaggataaaattttcctgatc
gacaacggcgataccgtcgaattccagaacggcgtcggccgcaaagccggcaaaatcccg
gcgggcaacgtgctgatcgacggactgggcgtcggcgacgtggggaacatcgttctccgc
gaccggaagctgctgtcccaggacggcatcctggtcgtcgtcgtcacgctgagcaagcaa
gacggcacgattctgtccggaccggacatcatctcgcgcggtttcgtgtacgtgcgcgaa
tccgaagggctgctcgaggaagcgaaccgcatcgtgaccggcaccctgcataaattgatg
aacgaaaacgtgaacgagtgggcgtcgctgaagacgaacgtcaaagacgcgctcggacgt
ttcctgtacgaacaaacaaaaagaagaccgatgatcctgccaatcattatggaagtgtga

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