Cohnella candidum: EAV92_05370
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Entry
EAV92_05370 CDS
T05696
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
coh
Cohnella candidum
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
coh03009
]
EAV92_05370 (rimO)
Enzymes [BR:
coh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EAV92_05370 (rimO)
Ribosome biogenesis [BR:
coh03009
]
Prokaryotic type
ribosomal protein modification factors
EAV92_05370 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
AYQ72049
UniProt:
A0A3G3JX13
LinkDB
All DBs
Position
1155657..1156985
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AA seq
442 aa
AA seq
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MPEKVSVVTLGCEKNLVDSEIMSGLIHQRGFTLVEKPEDATVVIVNTCGFIDAAKEESVN
TILSLAELKETAKLKALIVSGCLTQRYKQVLMEEMPEIDGIVGTGDFHNINGIIDEALHG
RKPVYVGNPVFTYEEKLPRLLSTPRHTAYVKIAEGCDNACTFCSIPIMRGKFRSRSIESI
VAEAENLASQGVKEISLIAQDSTNYGVDLYEGFKLPELLNRVSEVEGVEWVRLHYAYPGF
FTDELIETMATNPKICKYIDMPLQHSEDAILKRMRRPGRQRDVRELVAKIRARIPEVALR
TSMIVGFPGETEEDFAKLCEFVREMKFDRLGVFTYSQEEDTPASRLPDQIPDEVKETRAS
TLMEIQRQVAQENASKYVGRTLEVLVERYDGRSDVFIGRSQFDAPEIDGEVYISGIRAEI
GDIRRVRITHAYEYDLSGEGIA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccggagaaagtcagcgtcgtcacgctcggctgcgagaaaaatttggtcgattcggaa
atcatgtccggactgattcaccaacggggatttacccttgtagagaagccggaagacgcg
accgtcgtaatcgtcaatacctgcggatttatagacgccgccaaggaagaatcggtcaac
acgattctcagcctcgcggaattgaaggaaacggccaagctgaaagccctgatcgtgtcg
ggatgcttaactcagcgttataagcaggtcctgatggaggaaatgccggaaatcgacggg
attgtcggaacgggcgatttccacaacatcaacgggatcatcgacgaggcgctccacgga
cgcaagccggtttacgtgggcaaccccgtttttacttatgaagaaaaactgcctcggctg
ctttccacgccccgccatactgcatacgttaaaatagccgaaggctgcgacaacgcttgt
acgttctgcagcattccgatcatgcgaggcaaattccgcagccgttcgatcgaatcgatc
gtggcggaagcggagaacctggcgtcacaaggcgtgaaggaaatcagcctgatcgcgcag
gactcgacgaactatggcgtggacctgtacgagggcttcaagctgccggaattgctgaac
cgcgtctccgaggtggaaggcgtcgaatgggtgcggctgcactacgcgtatccgggcttt
ttcaccgacgagctgatcgagacgatggcgacgaatccgaaaatctgcaaatatatcgac
atgccgcttcagcacagcgaggatgccattctgaagaggatgagacgccccggcaggcag
cgcgacgttcgcgagctcgtcgccaaaatccgcgcgcgcatcccggaagtcgcgcttcgc
acctcgatgatcgtcggttttcccggcgagacggaggaagacttcgccaaactgtgcgag
ttcgtccgcgaaatgaaattcgaccgcctcggcgtgttcacttattcgcaggaagaggat
acgccggccagccggctgccggatcaaattccggacgaggtgaaagaaacccgggccagc
acgctgatggaaatccagcgccaagtcgcccaggagaacgcctcgaaatacgtcggacgc
acgctggaagtgctcgtcgagcggtatgacggacggagcgacgtctttatcggccgcagc
caattcgacgcgccagaaatcgacggcgaagtgtacatcagcggcatccgcgcggaaatc
ggcgacatccgccgggtccgcatcacccacgcttacgaatacgacctttccggggaggga
atcgcgtga
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