Cohnella candidum: EAV92_05395
Help
Entry
EAV92_05395 CDS
T05696
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
coh
Cohnella candidum
Pathway
coh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EAV92_05395 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
coh03019
]
EAV92_05395 (rny)
Messenger RNA biogenesis [BR:
coh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EAV92_05395 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Innexin
Motif
Other DBs
NCBI-ProteinID:
AYQ72053
UniProt:
A0A3G3JUX9
LinkDB
All DBs
Position
1161572..1163116
Genome browser
AA seq
514 aa
AA seq
DB search
MLDTWIWVLIVLVVGALFFGIGYVVRKSIAEAKISSANEEASRIVESAKKDAEAIRKETV
LEAKDEVHKLRNEAERDIRERRNEIQRQERRLLQKEESLDRKLEALERKEEQVANKEKRV
EESQEQVEILHKRQVVELERISNLSTEEAKQLILSTVEQEVRVETAQMIKDIEQEAKHEA
DKKARDIISLAIQRCAADHVAETTVSVVTLPNEEMKGRIIGREGRNIRALETLTGIDLII
DDTPEAVILSGFDPIRREIARTSLEKLVADGRIHPARIEEMVEKSRKEVDERIREYGEQA
TFEVGVHGLHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLTGLMAAELGEDVSLAKRAGL
LHDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIHSHHGDVEATSVIAMLVGAADAL
SAARPGARRETLETYIKRLEKLEDISESFEGVEKSYAIQAGREVRVMVQPEKIDDTEAFR
LARDITKKIESELDYPGHIKVTVIRETRAVEYAK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgctggacacctggatctgggtcttgatcgttctcgttgttggcgcgcttttctttggg
atcggttatgtcgtgcgcaaatccattgcggaagcgaagatttccagcgccaatgaagaa
gccagccgaattgtcgaaagcgccaagaaagacgcggaagcgattcggaaagaaacggtg
ctggaagccaaagacgaggtgcataagctccgtaacgaggcggaacgcgacattcgcgaa
cgccgcaacgaaattcaacgccaggaaaggcggctgttacagaaggaagagtcgctggat
cgcaagctggaagcgttggaacgtaaagaggagcaagttgccaacaaagagaaacgagtc
gaagaatcccaggaacaagtcgaaatcctgcacaaacgtcaggtggtggagctcgagcgc
atttccaacctgtcgacggaagaagcgaagcagctgattttgtcgacggtcgaacaagag
gtacgcgtcgagaccgcgcaaatgatcaaggatatcgagcaagaagcgaaacacgaagcg
gacaagaaagcccgggacatcatctcgctcgccattcagcgctgcgccgcggatcacgtg
gcggagacgacggtttccgtcgtaacgctgccgaacgaagagatgaaaggccggatcatc
ggccgcgaaggccgcaacatccgtgcgcttgaaacgttgacggggatcgacctcatcatc
gacgacacgccggaagcggttatcctgtcgggtttcgatccgattcggcgcgaaattgcg
agaacttcactggagaaattggtcgcggacggacggattcacccggcccgcatcgaggaa
atggtggagaagtcccgcaaggaagtggacgaacggattcgggaatacggcgagcaggcg
accttcgaggtcggcgtgcacggtcttcatccggatttgatcaaaatcctgggccgcctg
aaattccggacgagttacggccagaacgtgctgaagcactcgatggaagtcgcttactta
accggactgatggctgcggaattgggagaagacgtttcgcttgccaaacgcgccggcttg
ctgcacgatatcggcaaagcgctcgaccacgaagtggaaggttcgcatgtcgagatcggc
gttgaattggccaagaagtacaaagagcatccggtcgtcatcaacagcatccactcccac
catggagacgtggaagcgacttcggtcatcgcgatgctcgtcggcgccgccgacgcgctc
agcgcagcccgtccgggcgcgcgccgcgagacgcttgagacgtacatcaaacggctcgag
aagcttgaggacatttccgaatcgttcgaaggcgtggagaaatcctatgccatccaagcg
ggccgggaagtgcgcgtcatggttcaaccggagaagatcgacgatacggaagcgttccgc
ctggcgcgcgacatcacgaagaagatcgagagcgagctggattatccgggtcacatcaag
gtcaccgtcattcgggaaacccgcgccgtcgagtacgcgaaataa
DBGET
integrated database retrieval system